Detailed information    

insolico Bioinformatically predicted

Overview


Name   yaaT   Type   Regulator
Locus tag   ACG3JE_RS02260 Genome accession   NZ_CP171736
Coordinates   414526..415326 (+) Length   266 a.a.
NCBI ID   WP_003104246.1    Uniprot ID   A0ABN0IUJ8
Organism   Streptococcus parauberis strain DB-M17     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context


Location: 409526..420326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JE_RS02230 (ACG3JE_02230) - 409749..410702 (+) 954 WP_003106246.1 branched-chain amino acid ABC transporter permease -
  ACG3JE_RS02235 (ACG3JE_02235) - 410703..411467 (+) 765 WP_003103139.1 ABC transporter ATP-binding protein -
  ACG3JE_RS02240 (ACG3JE_02240) - 411467..412177 (+) 711 WP_003106074.1 ABC transporter ATP-binding protein -
  ACG3JE_RS02245 (ACG3JE_02245) - 412259..412921 (+) 663 WP_003106248.1 CBS domain-containing protein -
  ACG3JE_RS02250 (ACG3JE_02250) tmk 412985..413641 (+) 657 WP_003105765.1 dTMP kinase -
  ACG3JE_RS02255 (ACG3JE_02255) - 413654..414529 (+) 876 WP_003104949.1 DNA polymerase III subunit delta' -
  ACG3JE_RS02260 (ACG3JE_02260) yaaT 414526..415326 (+) 801 WP_003104246.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ACG3JE_RS02265 (ACG3JE_02265) yabA 415370..415639 (+) 270 WP_045406722.1 DNA replication initiation control protein YabA -
  ACG3JE_RS02270 (ACG3JE_02270) rsmI 415643..416512 (+) 870 WP_003106249.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACG3JE_RS02275 (ACG3JE_02275) - 416662..417057 (+) 396 WP_003104681.1 DUF5684 domain-containing protein -
  ACG3JE_RS02280 (ACG3JE_02280) - 417085..417717 (-) 633 WP_003106250.1 copper homeostasis protein CutC -
  ACG3JE_RS02285 (ACG3JE_02285) serC 417834..418925 (+) 1092 WP_003106251.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACG3JE_RS02290 (ACG3JE_02290) - 418948..419496 (+) 549 WP_004234714.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 30177.09 Da        Isoelectric Point: 8.4486

>NTDB_id=948819 ACG3JE_RS02260 WP_003104246.1 414526..415326(+) (yaaT) [Streptococcus parauberis strain DB-M17]
MTKVIGVKYGQANLAKFVKTDKEFPETSLLVIKDGKGSYLAKVSHKMREIADEKLPKDLPEIVREASEMDTKAHENNASY
AQSSRKLVKELIEANKLQMKIVDIIFPLERSFVLITFTAEDRVDFRQLLKDLATLFKTRIELRQINSREEAKIHGAIGPC
GRPLCCTSFLGEFPPVSIKMLKNQGLSLNSGKSQGYCGRLLCCLKYEDDFYKESKQKFPDYGTIVETKDGLGRVVSIDLF
KEILKIKLEENDTVVPYPLEEVKFGQ

Nucleotide


Download         Length: 801 bp        

>NTDB_id=948819 ACG3JE_RS02260 WP_003104246.1 414526..415326(+) (yaaT) [Streptococcus parauberis strain DB-M17]
ATGACTAAGGTAATTGGTGTCAAGTACGGACAAGCAAACTTGGCGAAATTTGTAAAAACAGATAAAGAATTTCCGGAAAC
AAGTCTGCTTGTTATAAAAGATGGCAAAGGTAGTTATTTAGCTAAAGTTTCACATAAGATGAGAGAAATTGCTGACGAAA
AATTACCCAAAGATCTTCCAGAGATTGTTCGAGAAGCCTCTGAAATGGACACCAAAGCCCATGAAAACAATGCTAGTTAT
GCCCAATCTTCTCGAAAACTTGTTAAAGAGCTCATTGAAGCTAACAAGTTACAAATGAAGATTGTTGATATTATCTTTCC
TTTAGAAAGAAGTTTCGTTTTGATAACATTTACAGCTGAGGACCGTGTTGATTTCAGACAACTATTAAAGGACTTAGCTA
CGCTGTTCAAAACAAGAATTGAATTAAGACAAATTAATAGCCGAGAAGAAGCAAAAATCCATGGGGCAATTGGGCCTTGT
GGTCGTCCCTTATGCTGTACGAGCTTTTTAGGCGAGTTTCCCCCTGTTTCGATAAAAATGTTAAAAAATCAAGGATTATC
ATTAAATTCTGGCAAAAGTCAGGGTTATTGTGGACGTTTGCTGTGTTGTTTAAAATATGAAGACGATTTCTATAAAGAAA
GTAAGCAAAAATTTCCTGATTATGGCACAATTGTTGAAACAAAAGATGGTTTAGGACGTGTTGTCTCTATTGACCTCTTT
AAAGAAATTCTTAAAATTAAACTAGAAGAAAATGATACAGTTGTTCCTTACCCACTAGAGGAGGTAAAATTTGGTCAATA
A

Domains


Predicted by InterProScan.

(61-145)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

40.684

98.872

0.402