Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8609_RS03075 | Genome accession | NZ_AP028412 |
| Coordinates | 593527..593910 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain IDH-12128 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 588527..598910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8609_RS03055 (I12128_06060) | - | 588606..590540 (-) | 1935 | WP_002934608.1 | RNB domain-containing ribonuclease | - |
| R8609_RS03060 (I12128_06070) | ilvC | 590659..591681 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R8609_RS03065 (I12128_06080) | - | 591685..592767 (+) | 1083 | WP_002934609.1 | divergent polysaccharide deacetylase family protein | - |
| R8609_RS03070 (I12128_06090) | dprA | 592757..593530 (+) | 774 | WP_032584684.1 | DNA-processing protein DprA | Machinery gene |
| R8609_RS03075 (I12128_06100) | dprB | 593527..593910 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8609_RS03080 (I12128_06110) | - | 593939..594778 (+) | 840 | WP_074484747.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8609_RS03085 (I12128_06120) | msrA | 594954..595451 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8609_RS03090 (I12128_06130) | ppa | 595493..596011 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8609_RS03095 (I12128_06140) | adk | 596021..596599 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8609_RS03100 (I12128_06150) | aspS | 596596..598347 (-) | 1752 | WP_032584680.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=94827 R8609_RS03075 WP_002852281.1 593527..593910(+) (dprB) [Campylobacter jejuni strain IDH-12128]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=94827 R8609_RS03075 WP_002852281.1 593527..593910(+) (dprB) [Campylobacter jejuni strain IDH-12128]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |