Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WDW98_RS18265 Genome accession   NZ_CP147720
Coordinates   3842762..3843163 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain CGMCC 1.1788     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3837762..3848163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDW98_RS18250 - 3839773..3841809 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  WDW98_RS18255 - 3841851..3842381 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  WDW98_RS18260 - 3842381..3842743 (-) 363 WP_005410717.1 response regulator -
  WDW98_RS18265 pilG 3842762..3843163 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  WDW98_RS18270 gshB 3843404..3844351 (+) 948 WP_024958137.1 glutathione synthase -
  WDW98_RS18275 - 3844351..3845235 (+) 885 WP_005410719.1 energy transducer TonB -
  WDW98_RS18280 tsaB 3845811..3846524 (-) 714 WP_024958691.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=948201 WDW98_RS18265 WP_005418455.1 3842762..3843163(-) (pilG) [Stenotrophomonas maltophilia strain CGMCC 1.1788]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=948201 WDW98_RS18265 WP_005418455.1 3842762..3843163(-) (pilG) [Stenotrophomonas maltophilia strain CGMCC 1.1788]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677