Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   V7S31_RS14205 Genome accession   NZ_CP147655
Coordinates   2914345..2915097 (-) Length   250 a.a.
NCBI ID   WP_020956151.1    Uniprot ID   -
Organism   Bacillus velezensis strain M1     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2909345..2920097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7S31_RS14180 mreC 2909781..2910644 (-) 864 WP_007408166.1 rod shape-determining protein MreC -
  V7S31_RS14185 mreB 2910675..2911688 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  V7S31_RS14190 radC 2911780..2912475 (-) 696 WP_007408165.1 DNA repair protein RadC -
  V7S31_RS14195 - 2912507..2913076 (-) 570 WP_007408164.1 Maf family protein -
  V7S31_RS14200 - 2913217..2914218 (-) 1002 WP_032866593.1 SPOR domain-containing protein -
  V7S31_RS14205 comC 2914345..2915097 (-) 753 WP_020956151.1 A24 family peptidase Machinery gene
  V7S31_RS14210 - 2915237..2916529 (-) 1293 WP_007408161.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  V7S31_RS14215 - 2916588..2919230 (-) 2643 WP_039063361.1 valine--tRNA ligase -
  V7S31_RS14220 - 2919683..2919874 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27129.84 Da        Isoelectric Point: 9.5938

>NTDB_id=947882 V7S31_RS14205 WP_020956151.1 2914345..2915097(-) (comC) [Bacillus velezensis strain M1]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCRLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTVTDLQYMLIPDKVLLFFLPLFIAGRMFSPLGSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGRLGKKQPFPFAPAISAGSALSYLYGEELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=947882 V7S31_RS14205 WP_020956151.1 2914345..2915097(-) (comC) [Bacillus velezensis strain M1]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTGATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTGCGAAT
CTCGGTTATTTCGCCGCGTTCAGCCTGTTCGTTTTGCCGTTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTTTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCGAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCA
TGCTTATTTACGGCTGCAGGTATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTGCTCAT
GATTGTTACCGTGACGGATCTGCAATATATGCTGATTCCTGACAAGGTTCTGCTGTTTTTTCTTCCGCTTTTCATCGCCG
GCCGTATGTTTTCTCCGTTGGGTTCATGGTATGCAGGGTTTGCCGGAGCCGTTTGCGGATTTTTTCTGCTTGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGCCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCCGTATACGGTATGTGCGCCGCAGCCCGGGGCAGGCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGAAGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGCGGGGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

58.871

99.2

0.584