Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V7S31_RS08550 Genome accession   NZ_CP147655
Coordinates   1647161..1647625 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain M1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1642161..1652625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7S31_RS08530 - 1642642..1644462 (+) 1821 WP_023356869.1 PAS domain-containing protein -
  V7S31_RS08535 - 1644487..1645656 (-) 1170 WP_015417364.1 aminotransferase A -
  V7S31_RS08540 - 1645857..1646018 (-) 162 WP_007409608.1 hypothetical protein -
  V7S31_RS08545 cheV 1646207..1647118 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  V7S31_RS08550 kre 1647161..1647625 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V7S31_RS08555 - 1647748..1649040 (-) 1293 WP_007611093.1 MFS transporter -
  V7S31_RS08560 - 1649116..1649610 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  V7S31_RS08565 - 1649685..1650548 (-) 864 WP_015239758.1 metallophosphoesterase -
  V7S31_RS08570 fadH 1650693..1651457 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  V7S31_RS08575 - 1651571..1652119 (+) 549 Protein_1630 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=947858 V7S31_RS08550 WP_003154622.1 1647161..1647625(-) (kre) [Bacillus velezensis strain M1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=947858 V7S31_RS08550 WP_003154622.1 1647161..1647625(-) (kre) [Bacillus velezensis strain M1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929