Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   V7S31_RS05745 Genome accession   NZ_CP147655
Coordinates   1130648..1131439 (+) Length   263 a.a.
NCBI ID   WP_338816692.1    Uniprot ID   -
Organism   Bacillus velezensis strain M1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125648..1136439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7S31_RS05720 - 1127643..1128527 (+) 885 WP_338816690.1 PhzF family phenazine biosynthesis isomerase -
  V7S31_RS05725 - 1128604..1129188 (+) 585 WP_007408549.1 nitroreductase -
  V7S31_RS05730 - 1129227..1129418 (-) 192 WP_003155508.1 YfhD family protein -
  V7S31_RS05735 - 1129489..1129599 (-) 111 WP_003155504.1 YfhE family protein -
  V7S31_RS05740 - 1129657..1130556 (-) 900 WP_338816691.1 TIGR01777 family oxidoreductase -
  V7S31_RS05745 recX 1130648..1131439 (+) 792 WP_338816692.1 recombination regulator RecX Regulator
  V7S31_RS05750 - 1131446..1131760 (+) 315 WP_007408553.1 YfhH family protein -
  V7S31_RS05755 - 1131905..1133098 (+) 1194 WP_025284446.1 MFS transporter -
  V7S31_RS05760 - 1133138..1133527 (-) 390 WP_039062791.1 DUF2606 family protein -
  V7S31_RS05765 - 1133490..1134401 (-) 912 WP_335404184.1 serine protease -
  V7S31_RS05770 - 1134546..1134698 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  V7S31_RS05775 - 1134822..1135091 (+) 270 WP_003155492.1 YfhJ family protein -
  V7S31_RS05780 - 1135223..1135750 (+) 528 WP_106080348.1 SH3 domain-containing protein -
  V7S31_RS05785 - 1135836..1136171 (+) 336 WP_003155488.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31052.25 Da        Isoelectric Point: 5.8035

>NTDB_id=947842 V7S31_RS05745 WP_338816692.1 1130648..1131439(+) (recX) [Bacillus velezensis strain M1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDEFDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
QDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYATTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRVQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=947842 V7S31_RS05745 WP_338816692.1 1130648..1131439(+) (recX) [Bacillus velezensis strain M1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGTTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CAGGATCATCTGAAGAAAAAAGAAACACCGGATATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCGGAAGCTTATGCGACCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATTCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGTGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.327

100

0.783