Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   NMC33_RS14710 Genome accession   NZ_AP025842
Coordinates   3025339..3025965 (-) Length   208 a.a.
NCBI ID   WP_022647658.1    Uniprot ID   A0A431SK42
Organism   Enterobacter hormaechei strain FUJ80379     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3020339..3030965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMC33_RS14695 (FJMB80379_28770) helD 3020578..3022632 (-) 2055 WP_022647661.1 DNA helicase IV -
  NMC33_RS14700 (FJMB80379_28780) - 3022755..3023201 (+) 447 WP_022647660.1 YccF domain-containing protein -
  NMC33_RS14705 (FJMB80379_28790) yccS 3023220..3025382 (+) 2163 WP_022647659.1 YccS family putative transporter -
  NMC33_RS14710 (FJMB80379_28800) sxy/tfoX 3025339..3025965 (-) 627 WP_022647658.1 TfoX/Sxy family DNA transformation protein Regulator
  NMC33_RS14715 (FJMB80379_28810) sulA 3026183..3026692 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  NMC33_RS14720 (FJMB80379_28820) ompA 3027049..3028101 (+) 1053 WP_017694761.1 porin OmpA -
  NMC33_RS14725 (FJMB80379_28830) matP 3028167..3028619 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  NMC33_RS14730 (FJMB80379_28840) - 3028806..3030566 (+) 1761 WP_022647656.1 Lon protease family protein -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23940.50 Da        Isoelectric Point: 9.4592

>NTDB_id=94663 NMC33_RS14710 WP_022647658.1 3025339..3025965(-) (sxy/tfoX) [Enterobacter hormaechei strain FUJ80379]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSVLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=94663 NMC33_RS14710 WP_022647658.1 3025339..3025965(-) (sxy/tfoX) [Enterobacter hormaechei strain FUJ80379]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTGTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A431SK42

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment