Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | WBM82_RS00735 | Genome accession | NZ_CP147494 |
| Coordinates | 44362..44652 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain YT1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39362..49652
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WBM82_RS00695 (WBM82_00695) | darA | 39385..39714 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| WBM82_RS00700 (WBM82_00700) | yaaR | 39727..40167 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| WBM82_RS00705 (WBM82_00705) | holB | 40179..41168 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| WBM82_RS00710 (WBM82_00710) | ricT | 41171..41998 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| WBM82_RS00715 (WBM82_00715) | yabA | 42013..42372 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| WBM82_RS00720 (WBM82_00720) | trmNF | 42431..43174 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| WBM82_RS00725 (WBM82_00725) | yazA | 43161..43460 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| WBM82_RS00730 (WBM82_00730) | rsmI | 43435..44313 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| WBM82_RS00735 (WBM82_00735) | abrB | 44362..44652 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| WBM82_RS00740 (WBM82_00740) | metG | 45147..47141 (+) | 1995 | WP_029726394.1 | methionine--tRNA ligase | - |
| WBM82_RS00745 (WBM82_00745) | dayD | 47221..47988 (+) | 768 | WP_029726393.1 | TatD family hydrolase | - |
| WBM82_RS00750 (WBM82_00750) | yabE | 48144..49457 (+) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=946384 WBM82_RS00735 WP_003226760.1 44362..44652(-) (abrB) [Bacillus subtilis strain YT1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=946384 WBM82_RS00735 WP_003226760.1 44362..44652(-) (abrB) [Bacillus subtilis strain YT1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |