Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   WBI56_RS06180 Genome accession   NZ_CP147492
Coordinates   1198337..1198993 (+) Length   218 a.a.
NCBI ID   WP_003239278.1    Uniprot ID   -
Organism   Bacillus subtilis strain MC4-2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1193337..1203993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBI56_RS06150 (WBI56_06150) oppF 1193591..1194508 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  WBI56_RS06155 (WBI56_06155) yjbB 1194615..1195832 (+) 1218 WP_338734129.1 MFS transporter -
  WBI56_RS06160 (WBI56_06160) yjbC 1195995..1196573 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  WBI56_RS06165 (WBI56_06165) spx 1196754..1197149 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  WBI56_RS06170 (WBI56_06170) yjbE 1197404..1198060 (-) 657 WP_338733216.1 TerC family protein -
  WBI56_RS06175 (WBI56_06175) - 1198230..1198370 (+) 141 WP_119122854.1 hypothetical protein -
  WBI56_RS06180 (WBI56_06180) mecA 1198337..1198993 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  WBI56_RS06185 (WBI56_06185) - 1198988..1199110 (-) 123 WP_021479547.1 hypothetical protein -
  WBI56_RS06190 (WBI56_06190) coiA 1199154..1200305 (+) 1152 WP_338733219.1 competence protein CoiA Machinery gene
  WBI56_RS06195 (WBI56_06195) pepF 1200535..1202364 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  WBI56_RS06200 (WBI56_06200) - 1202402..1202569 (-) 168 WP_003244944.1 hypothetical protein -
  WBI56_RS06205 (WBI56_06205) spxH 1202883..1203782 (-) 900 WP_024573348.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25776.69 Da        Isoelectric Point: 4.1174

>NTDB_id=946328 WBI56_RS06180 WP_003239278.1 1198337..1198993(+) (mecA) [Bacillus subtilis strain MC4-2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=946328 WBI56_RS06180 WP_003239278.1 1198337..1198993(+) (mecA) [Bacillus subtilis strain MC4-2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGATAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995