Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WBI56_RS04555 Genome accession   NZ_CP147492
Coordinates   896796..897590 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis strain MC4-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 891796..902590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBI56_RS04525 (WBI56_04525) sxzA 892636..893667 (+) 1032 WP_029317459.1 iron ABC transporter permease -
  WBI56_RS04530 (WBI56_04530) yfhB 893782..894663 (+) 882 WP_063335720.1 PhzF family phenazine biosynthesis protein -
  WBI56_RS04535 (WBI56_04535) yfhC 894751..895335 (+) 585 WP_129092338.1 nitroreductase -
  WBI56_RS04540 (WBI56_04540) yfhD 895374..895565 (-) 192 WP_014479215.1 YfhD family protein -
  WBI56_RS04545 (WBI56_04545) yfhE 895631..895741 (-) 111 WP_003223230.1 YfhE family protein -
  WBI56_RS04550 (WBI56_04550) yfhF 895796..896707 (-) 912 WP_338732872.1 TIGR01777 family oxidoreductase -
  WBI56_RS04555 (WBI56_04555) recX 896796..897590 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  WBI56_RS04560 (WBI56_04560) yfhH 897592..897906 (+) 315 WP_003244592.1 YfhH family protein -
  WBI56_RS04565 (WBI56_04565) yfhI 898049..899242 (+) 1194 WP_003243500.1 MFS transporter -
  WBI56_RS04570 (WBI56_04570) sspK 899274..899426 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WBI56_RS04575 (WBI56_04575) yfhJ 899551..899820 (+) 270 WP_003243789.1 YfhJ family protein -
  WBI56_RS04580 (WBI56_04580) yfhK 899965..900483 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WBI56_RS04585 (WBI56_04585) spdL 900568..900900 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  WBI56_RS04590 (WBI56_04590) ephM 900887..901747 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=946316 WBI56_RS04555 WP_038428646.1 896796..897590(+) (recX) [Bacillus subtilis strain MC4-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=946316 WBI56_RS04555 WP_038428646.1 896796..897590(+) (recX) [Bacillus subtilis strain MC4-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996