Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | WBI56_RS00245 | Genome accession | NZ_CP147492 |
| Coordinates | 44364..44654 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain MC4-2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39364..49654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WBI56_RS00205 (WBI56_00205) | darA | 39387..39716 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| WBI56_RS00210 (WBI56_00210) | yaaR | 39729..40169 (+) | 441 | WP_338731907.1 | YaaR family protein | - |
| WBI56_RS00215 (WBI56_00215) | holB | 40181..41170 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| WBI56_RS00220 (WBI56_00220) | ricT | 41173..42000 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| WBI56_RS00225 (WBI56_00225) | yabA | 42015..42374 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| WBI56_RS00230 (WBI56_00230) | trmNF | 42433..43176 (+) | 744 | WP_021479732.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| WBI56_RS00235 (WBI56_00235) | yazA | 43163..43462 (+) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| WBI56_RS00240 (WBI56_00240) | rsmI | 43437..44315 (+) | 879 | WP_038428262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| WBI56_RS00245 (WBI56_00245) | abrB | 44364..44654 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| WBI56_RS00250 (WBI56_00250) | metG | 45149..47143 (+) | 1995 | WP_338731913.1 | methionine--tRNA ligase | - |
| WBI56_RS00255 (WBI56_00255) | dayD | 47223..47990 (+) | 768 | WP_338731915.1 | TatD family hydrolase | - |
| WBI56_RS00260 (WBI56_00260) | yabE | 48146..49459 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=946305 WBI56_RS00245 WP_003226760.1 44364..44654(-) (abrB) [Bacillus subtilis strain MC4-2]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=946305 WBI56_RS00245 WP_003226760.1 44364..44654(-) (abrB) [Bacillus subtilis strain MC4-2]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |