Detailed information NTG0094609

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R9A04_RS06200
• Genome accession: NZ_AP028402
• Coordinates: 1185899..1186849 (+)
• Length: 316 a.a.
• NCBI ID: WP_317729674.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-11531
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1180899..1191849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9A04_RS06170 (B11531_12150)	neuC	1181490..1182614 (+)	1125	WP_317729671.1	UDP-N-acetylglucosamine 2-epimerase	-
R9A04_RS06175 (B11531_12160)	-	1182607..1183224 (+)	618	WP_019260375.1	glycosyltransferase	-
R9A04_RS06180 (B11531_12170)	-	1183221..1183553 (+)	333	WP_019260376.1	hypothetical protein	-
R9A04_RS06185 (B11531_12180)	-	1183550..1184215 (+)	666	WP_317676758.1	cytidylyltransferase domain-containing protein	-
R9A04_RS06190 (B11531_12190)	-	1184203..1185036 (+)	834	WP_317729672.1	CatB-related O-acetyltransferase	-
R9A04_RS06195 (B11531_12200)	waaV	1185028..1185840 (-)	813	WP_317729673.1	glycosyltransferase family 2 protein	-
R9A04_RS06200 (B11531_12210)	waaF	1185899..1186849 (+)	951	WP_317729674.1	glycosyltransferase family 9 protein	Regulator
R9A04_RS06205 (B11531_12220)	-	1186835..1187599 (-)	765	WP_317729675.1	glycosyltransferase family 25 protein	-
R9A04_RS06210 (B11531_12230)	gmhA	1187599..1188159 (-)	561	WP_317729676.1	D-sedoheptulose 7-phosphate isomerase	-
R9A04_RS06215 (B11531_12240)	rfaE1	1188156..1189541 (-)	1386	WP_317729677.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R9A04_RS06220 (B11531_12250)	rfaD	1189534..1190487 (-)	954	WP_002872242.1	ADP-glyceromanno-heptose 6-epimerase	-
R9A04_RS06225 (B11531_12260)	gmhB	1190488..1191049 (-)	562	Protein_1202	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R9A04_RS06230 (B11531_12270)	-	1191130..1191432 (+)	303	WP_002852762.1	c-type cytochrome	-
R9A04_RS06235 (B11531_12280)	ccoS	1191455..1191661 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36221.78 Da
• Isoelectric Point: 10.2421

>NTDB_id=94609 R9A04_RS06200 WP_317729674.1 1185899..1186849(+) (waaF) [Campylobacter jejuni strain BCH-11531]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=94609 R9A04_RS06200 WP_317729674.1 1185899..1186849(+) (waaF) [Campylobacter jejuni strain BCH-11531]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCAAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGTATGAAAGATTTAAAGCCTGAAGTGATTTTAAAAGCGATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.631	99.367	0.93