Detailed information NTG0945558

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: WAA17_RS18355
• Genome accession: NZ_CP147000
• Coordinates: 3698744..3699889 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis isolate K8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3693744..3704889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAA17_RS18335 (WAA17_18335)	-	3694219..3694935 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
WAA17_RS18340 (WAA17_18340)	narK	3695033..3696223 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
WAA17_RS18345 (WAA17_18345)	argS	3696357..3698027 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
WAA17_RS18350 (WAA17_18350)	-	3698024..3698452 (-)	429	WP_003151069.1	DUF1934 family protein	-
WAA17_RS18355 (WAA17_18355)	rapF	3698744..3699889 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
WAA17_RS18360 (WAA17_18360)	-	3699873..3699992 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
WAA17_RS18365 (WAA17_18365)	speB	3700115..3700987 (-)	873	WP_003151054.1	agmatinase	-
WAA17_RS18370 (WAA17_18370)	speE	3701047..3701877 (-)	831	WP_003151052.1	spermidine synthase	-
WAA17_RS18375 (WAA17_18375)	-	3702077..3704149 (+)	2073	WP_003151050.1	transglycosylase domain-containing protein	-
WAA17_RS18380 (WAA17_18380)	-	3704173..3704604 (-)	432	WP_003151048.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=945558 WAA17_RS18355 WP_024085922.1 3698744..3699889(+) (rapF) [Bacillus velezensis isolate K8]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=945558 WAA17_RS18355 WP_024085922.1 3698744..3699889(+) (rapF) [Bacillus velezensis isolate K8]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533