Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | ACFIGL_RS15045 | Genome accession | NZ_CP170734 |
| Coordinates | 2834846..2835850 (-) | Length | 334 a.a. |
| NCBI ID | WP_003229718.1 | Uniprot ID | O32055 |
| Organism | Bacillus subtilis strain M51 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2829846..2840850
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIGL_RS15015 (ACFIGL_15025) | yrbG | 2830820..2831476 (-) | 657 | WP_004398801.1 | DUF421 domain-containing protein | - |
| ACFIGL_RS15020 (ACFIGL_15030) | - | 2831674..2832063 (+) | 390 | WP_004398667.1 | TIGR04086 family membrane protein | - |
| ACFIGL_RS15025 (ACFIGL_15035) | yajC | 2832120..2832386 (-) | 267 | WP_004398708.1 | preprotein translocase subunit YajC | - |
| ACFIGL_RS15030 (ACFIGL_15040) | tgt | 2832423..2833568 (-) | 1146 | WP_003229725.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| ACFIGL_RS15035 (ACFIGL_15045) | queA | 2833595..2834623 (-) | 1029 | WP_003229723.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| ACFIGL_RS15040 (ACFIGL_15050) | yrzS | 2834653..2834853 (-) | 201 | WP_003222669.1 | DUF2905 domain-containing protein | - |
| ACFIGL_RS15045 (ACFIGL_15055) | ruvB | 2834846..2835850 (-) | 1005 | WP_003229718.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| ACFIGL_RS15050 (ACFIGL_15060) | ruvA | 2835861..2836466 (-) | 606 | WP_003229717.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| ACFIGL_RS15055 (ACFIGL_15065) | bofC | 2836605..2837117 (-) | 513 | WP_003229715.1 | sporulation cell-cell signaling protein BofC | - |
| ACFIGL_RS15060 (ACFIGL_15070) | csbX | 2837165..2838472 (-) | 1308 | WP_003246197.1 | MFS transporter | - |
| ACFIGL_RS15065 (ACFIGL_15075) | iolG | 2838543..2839568 (-) | 1026 | WP_004398990.1 | inositol 2-dehydrogenase | - |
| ACFIGL_RS15070 (ACFIGL_15080) | yrzF | 2839806..2840453 (+) | 648 | WP_003246159.1 | phosphotransferase | - |
| ACFIGL_RS15075 (ACFIGL_15085) | - | 2840499..2840621 (-) | 123 | WP_003229707.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37467.78 Da Isoelectric Point: 5.1631
>NTDB_id=945532 ACFIGL_RS15045 WP_003229718.1 2834846..2835850(-) (ruvB) [Bacillus subtilis strain M51]
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
Nucleotide
Download Length: 1005 bp
>NTDB_id=945532 ACFIGL_RS15045 WP_003229718.1 2834846..2835850(-) (ruvB) [Bacillus subtilis strain M51]
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ruvB | Streptococcus pneumoniae TIGR4 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae R6 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae D39 |
60.429 |
97.605 |
0.59 |
| ruvB | Synechocystis sp. PCC 6803 |
57.143 |
98.503 |
0.563 |
| ruvB | Helicobacter pylori 26695 |
52.744 |
98.204 |
0.518 |