Detailed information
Bioinformatically predicted
Overview
| Name | comEC | Type | Machinery gene |
| Locus tag | V4Q90_RS11910 | Genome accession | NZ_CP146990 |
| Coordinates | 2677849..2678658 (+) | Length | 269 a.a. |
| NCBI ID | WP_011212818.1 | Uniprot ID | A0AAN5PKE2 |
| Organism | Legionella pneumophila strain LEG1116 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2614031..2684483 | 2677849..2678658 | within | 0 |
Gene organization within MGE regions
Location: 2614031..2684483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V4Q90_RS11660 (V4Q90_11625) | - | 2614969..2616267 (+) | 1299 | WP_010945883.1 | nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein | - |
| V4Q90_RS11665 (V4Q90_11630) | - | 2616428..2617042 (-) | 615 | WP_011212772.1 | thiol:disulfide interchange protein DsbA/DsbL | - |
| V4Q90_RS11670 (V4Q90_11635) | - | 2617053..2617655 (-) | 603 | WP_011212773.1 | c-type cytochrome | - |
| V4Q90_RS11675 (V4Q90_11640) | yihA | 2617730..2618332 (+) | 603 | WP_011212774.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| V4Q90_RS11680 (V4Q90_11645) | cegC2 | 2618446..2621757 (+) | 3312 | WP_011212775.1 | Dot/Icm T4SS effector CegC2 | - |
| V4Q90_RS11685 (V4Q90_11650) | acs | 2621854..2623737 (-) | 1884 | WP_025519195.1 | acetate--CoA ligase | - |
| V4Q90_RS11690 (V4Q90_11655) | mmsB | 2623739..2624635 (-) | 897 | WP_011212777.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| V4Q90_RS11695 (V4Q90_11660) | - | 2624659..2626158 (-) | 1500 | WP_011212778.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| V4Q90_RS11700 (V4Q90_11665) | - | 2626269..2626445 (-) | 177 | WP_011212779.1 | dodecin domain-containing protein | - |
| V4Q90_RS11705 (V4Q90_11670) | - | 2626623..2629091 (+) | 2469 | WP_011212780.1 | hypothetical protein | - |
| V4Q90_RS11710 (V4Q90_11675) | dapB | 2629195..2629926 (-) | 732 | WP_011212781.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| V4Q90_RS11715 (V4Q90_11680) | - | 2630106..2630291 (-) | 186 | WP_011212782.1 | hypothetical protein | - |
| V4Q90_RS11720 (V4Q90_11685) | rocC | 2630648..2631340 (+) | 693 | WP_011212783.1 | ProQ/FinO family protein | Regulator |
| V4Q90_RS11725 (V4Q90_11690) | - | 2631341..2632411 (+) | 1071 | WP_011212784.1 | hypothetical protein | - |
| V4Q90_RS11730 (V4Q90_11695) | - | 2632511..2638138 (-) | 5628 | WP_350534576.1 | SdhB | - |
| V4Q90_RS11735 (V4Q90_11700) | pyk | 2638230..2639654 (-) | 1425 | WP_011212786.1 | pyruvate kinase | - |
| V4Q90_RS11740 (V4Q90_11705) | - | 2639638..2640828 (-) | 1191 | WP_011212787.1 | phosphoglycerate kinase | - |
| V4Q90_RS11745 (V4Q90_11710) | gap | 2640839..2641831 (-) | 993 | WP_011212788.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| V4Q90_RS11750 (V4Q90_11715) | tkt | 2641912..2643990 (-) | 2079 | WP_080019868.1 | transketolase | - |
| V4Q90_RS11755 (V4Q90_11720) | - | 2644176..2645510 (+) | 1335 | WP_011212790.1 | hypothetical protein | - |
| V4Q90_RS11760 (V4Q90_11725) | - | 2645610..2647625 (+) | 2016 | WP_025519199.1 | M3 family metallopeptidase | - |
| V4Q90_RS11770 (V4Q90_11735) | - | 2648432..2648752 (+) | 321 | WP_126297580.1 | hypothetical protein | - |
| V4Q90_RS11775 (V4Q90_11740) | cas9 | 2649228..2653346 (+) | 4119 | WP_011212792.1 | type II-B CRISPR-associated RNA-guided endonuclease Cas9/Csx12 | - |
| V4Q90_RS11780 (V4Q90_11745) | cas1 | 2653343..2654335 (+) | 993 | WP_011212793.1 | CRISPR-associated endonuclease Cas1 | - |
| V4Q90_RS11785 (V4Q90_11750) | cas2 | 2654342..2654641 (+) | 300 | WP_011212794.1 | CRISPR-associated endonuclease Cas2 | - |
| V4Q90_RS11790 (V4Q90_11755) | cas4 | 2654622..2655215 (+) | 594 | WP_011212795.1 | CRISPR-associated protein Cas4 | - |
| V4Q90_RS11795 (V4Q90_11760) | - | 2658253..2658690 (+) | 438 | WP_021437110.1 | YgjP-like metallopeptidase domain-containing protein | - |
| V4Q90_RS11800 (V4Q90_11765) | - | 2658680..2659354 (-) | 675 | WP_025519205.1 | S24 family peptidase | - |
| V4Q90_RS11805 (V4Q90_11770) | - | 2659516..2660385 (+) | 870 | WP_011212797.1 | hypothetical protein | - |
| V4Q90_RS11810 (V4Q90_11775) | - | 2660351..2660713 (+) | 363 | WP_021437111.1 | hypothetical protein | - |
| V4Q90_RS11815 (V4Q90_11780) | - | 2660726..2660929 (+) | 204 | WP_011212799.1 | carbon storage regulator | - |
| V4Q90_RS11820 (V4Q90_11785) | - | 2660926..2661228 (+) | 303 | WP_011212800.1 | TrbC/VirB2 family protein | - |
| V4Q90_RS11825 (V4Q90_11790) | - | 2661238..2661519 (+) | 282 | WP_011212801.1 | VirB3 family type IV secretion system protein | - |
| V4Q90_RS11830 (V4Q90_11795) | - | 2661506..2663986 (+) | 2481 | WP_011212802.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| V4Q90_RS11835 (V4Q90_11800) | - | 2663983..2664693 (+) | 711 | WP_011212803.1 | type IV secretion system protein | - |
| V4Q90_RS11840 (V4Q90_11805) | lvhB7 | 2664708..2664854 (+) | 147 | WP_011212804.1 | T4SS-associated protein LvhB7 | - |
| V4Q90_RS11845 (V4Q90_11810) | lvrD | 2664851..2665246 (+) | 396 | WP_011212805.1 | T4SS-associated protein LvrD | - |
| V4Q90_RS11850 (V4Q90_11815) | - | 2665250..2666290 (+) | 1041 | WP_011212806.1 | type IV secretion system protein | - |
| V4Q90_RS11855 (V4Q90_11820) | - | 2666287..2667003 (+) | 717 | WP_011212807.1 | type IV secretion system protein | - |
| V4Q90_RS11860 (V4Q90_11825) | virB9 | 2667000..2667752 (+) | 753 | WP_011212808.1 | P-type conjugative transfer protein VirB9 | - |
| V4Q90_RS11865 (V4Q90_11830) | - | 2667749..2668840 (+) | 1092 | WP_011212809.1 | TrbI/VirB10 family protein | - |
| V4Q90_RS11870 (V4Q90_11835) | virB11 | 2668842..2669846 (+) | 1005 | WP_011212810.1 | P-type DNA transfer ATPase VirB11 | - |
| V4Q90_RS11875 (V4Q90_11840) | - | 2669839..2671740 (+) | 1902 | WP_011212811.1 | type IV secretory system conjugative DNA transfer family protein | - |
| V4Q90_RS11880 (V4Q90_11845) | - | 2671838..2672635 (+) | 798 | WP_011212812.1 | DUF1566 domain-containing protein | - |
| V4Q90_RS11885 (V4Q90_11850) | - | 2672869..2673630 (+) | 762 | WP_126297581.1 | hypothetical protein | - |
| V4Q90_RS11890 (V4Q90_11855) | traA | 2673754..2676393 (-) | 2640 | WP_011212814.1 | Ti-type conjugative transfer relaxase TraA | - |
| V4Q90_RS11895 (V4Q90_11860) | - | 2676642..2676848 (+) | 207 | WP_011212815.1 | hypothetical protein | - |
| V4Q90_RS11900 (V4Q90_11865) | - | 2676835..2677104 (+) | 270 | WP_011212816.1 | conjugal transfer protein TraD | - |
| V4Q90_RS11905 (V4Q90_11870) | - | 2677198..2677845 (+) | 648 | WP_011212817.1 | hypothetical protein | - |
| V4Q90_RS11910 (V4Q90_11875) | comEC | 2677849..2678658 (+) | 810 | WP_011212818.1 | hypothetical protein | Machinery gene |
| V4Q90_RS11915 (V4Q90_11880) | - | 2678685..2679146 (-) | 462 | WP_011212819.1 | nucleoside deaminase | - |
| V4Q90_RS11920 (V4Q90_11885) | - | 2679139..2680566 (-) | 1428 | WP_011212820.1 | VUT family protein | - |
| V4Q90_RS11925 (V4Q90_11890) | - | 2680559..2680918 (-) | 360 | WP_011212821.1 | hypothetical protein | - |
| V4Q90_RS11930 (V4Q90_11895) | - | 2680935..2681582 (-) | 648 | WP_011212822.1 | LexA family transcriptional regulator | - |
| V4Q90_RS11935 (V4Q90_11900) | - | 2681751..2681990 (+) | 240 | WP_011212823.1 | hypothetical protein | - |
| V4Q90_RS11940 (V4Q90_11905) | - | 2682021..2682227 (+) | 207 | WP_011212824.1 | hypothetical protein | - |
| V4Q90_RS11945 (V4Q90_11910) | - | 2682176..2683384 (+) | 1209 | WP_011212825.1 | site-specific integrase | - |
| V4Q90_RS11950 (V4Q90_11915) | - | 2683611..2684435 (+) | 825 | WP_011212826.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 269 a.a. Molecular weight: 30583.73 Da Isoelectric Point: 7.2561
>NTDB_id=945433 V4Q90_RS11910 WP_011212818.1 2677849..2678658(+) (comEC) [Legionella pneumophila strain LEG1116]
MKLQIFDVEHGACALLTCINGTRLMIDCGHNANSGWKPGSYLRSQGVTHLDMLAITNYDEDHVSGLPDLLEQVHVNWLWR
NPSVSATDIKNMKAKNGMGYGIESLVNILPTYKYTGWQPPEFSFVERRGFYAPYPTFVDTNNLSMAIHLNIAGINFLFSG
DLESGGWNTLLKDQSFRNVIANTDIFIAPHHGRESGIYPQIFEEYQCFPHYIIMSDKSHMYDTQKTLDYYSSKARGGFFR
GKHRRVLTTRKDGSITFNFNFLKGECLVA
MKLQIFDVEHGACALLTCINGTRLMIDCGHNANSGWKPGSYLRSQGVTHLDMLAITNYDEDHVSGLPDLLEQVHVNWLWR
NPSVSATDIKNMKAKNGMGYGIESLVNILPTYKYTGWQPPEFSFVERRGFYAPYPTFVDTNNLSMAIHLNIAGINFLFSG
DLESGGWNTLLKDQSFRNVIANTDIFIAPHHGRESGIYPQIFEEYQCFPHYIIMSDKSHMYDTQKTLDYYSSKARGGFFR
GKHRRVLTTRKDGSITFNFNFLKGECLVA
Nucleotide
Download Length: 810 bp
>NTDB_id=945433 V4Q90_RS11910 WP_011212818.1 2677849..2678658(+) (comEC) [Legionella pneumophila strain LEG1116]
GTGAAATTACAAATTTTTGATGTAGAACATGGTGCATGCGCACTCTTAACATGCATTAATGGCACAAGACTAATGATTGA
CTGTGGACATAACGCTAATAGTGGCTGGAAACCAGGTTCTTACTTGCGCAGTCAAGGAGTAACCCATCTCGATATGTTAG
CCATAACTAATTACGATGAAGATCACGTGAGTGGATTACCTGATTTACTTGAGCAAGTACATGTTAATTGGTTATGGCGT
AATCCATCAGTTTCAGCAACAGATATAAAAAATATGAAAGCCAAAAATGGAATGGGATATGGGATTGAAAGTTTAGTAAA
TATTCTCCCGACATATAAATATACAGGATGGCAACCGCCTGAGTTTTCATTTGTTGAAAGACGGGGTTTTTATGCTCCTT
ACCCTACTTTTGTAGACACGAATAATCTAAGCATGGCCATTCATCTTAATATTGCAGGAATAAATTTTTTGTTTTCAGGC
GATTTAGAATCAGGAGGATGGAATACTCTGTTAAAAGATCAGAGCTTTCGGAATGTGATTGCGAACACAGATATTTTTAT
AGCACCCCATCATGGACGAGAAAGTGGGATTTATCCCCAAATTTTCGAAGAATATCAGTGTTTCCCTCACTATATTATAA
TGTCCGATAAAAGCCATATGTACGATACACAAAAAACTCTAGATTACTATTCTAGTAAAGCACGCGGTGGTTTTTTTAGG
GGGAAACATCGTCGAGTTTTAACGACAAGAAAGGATGGTTCAATAACCTTTAATTTTAATTTTTTAAAGGGGGAATGTCT
TGTAGCTTGA
GTGAAATTACAAATTTTTGATGTAGAACATGGTGCATGCGCACTCTTAACATGCATTAATGGCACAAGACTAATGATTGA
CTGTGGACATAACGCTAATAGTGGCTGGAAACCAGGTTCTTACTTGCGCAGTCAAGGAGTAACCCATCTCGATATGTTAG
CCATAACTAATTACGATGAAGATCACGTGAGTGGATTACCTGATTTACTTGAGCAAGTACATGTTAATTGGTTATGGCGT
AATCCATCAGTTTCAGCAACAGATATAAAAAATATGAAAGCCAAAAATGGAATGGGATATGGGATTGAAAGTTTAGTAAA
TATTCTCCCGACATATAAATATACAGGATGGCAACCGCCTGAGTTTTCATTTGTTGAAAGACGGGGTTTTTATGCTCCTT
ACCCTACTTTTGTAGACACGAATAATCTAAGCATGGCCATTCATCTTAATATTGCAGGAATAAATTTTTTGTTTTCAGGC
GATTTAGAATCAGGAGGATGGAATACTCTGTTAAAAGATCAGAGCTTTCGGAATGTGATTGCGAACACAGATATTTTTAT
AGCACCCCATCATGGACGAGAAAGTGGGATTTATCCCCAAATTTTCGAAGAATATCAGTGTTTCCCTCACTATATTATAA
TGTCCGATAAAAGCCATATGTACGATACACAAAAAACTCTAGATTACTATTCTAGTAAAGCACGCGGTGGTTTTTTTAGG
GGGAAACATCGTCGAGTTTTAACGACAAGAAAGGATGGTTCAATAACCTTTAATTTTAATTTTTTAAAGGGGGAATGTCT
TGTAGCTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC | Legionella pneumophila str. Paris |
100 |
100 |
1 |