Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   V4Q90_RS01305 Genome accession   NZ_CP146990
Coordinates   292803..293144 (+) Length   113 a.a.
NCBI ID   WP_350534629.1    Uniprot ID   -
Organism   Legionella pneumophila strain LEG1116     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 287803..298144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V4Q90_RS01280 (V4Q90_01280) acpP 288632..288880 (+) 249 WP_003631752.1 acyl carrier protein -
  V4Q90_RS01285 (V4Q90_01285) fabF 288900..290138 (+) 1239 WP_011213689.1 beta-ketoacyl-ACP synthase II -
  V4Q90_RS01290 (V4Q90_01290) mltG 290139..291137 (+) 999 WP_011213690.1 endolytic transglycosylase MltG -
  V4Q90_RS01295 (V4Q90_01295) tmk 291137..291775 (+) 639 WP_011213691.1 dTMP kinase -
  V4Q90_RS01300 (V4Q90_01300) - 291772..292677 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  V4Q90_RS01305 (V4Q90_01305) pilZ 292803..293144 (+) 342 WP_350534629.1 PilZ domain-containing protein Machinery gene
  V4Q90_RS01310 (V4Q90_01310) - 293204..293992 (+) 789 WP_011213694.1 TatD family hydrolase -
  V4Q90_RS01315 (V4Q90_01315) - 294104..295204 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  V4Q90_RS01320 (V4Q90_01320) - 295260..296552 (+) 1293 WP_350534630.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12408.38 Da        Isoelectric Point: 8.2421

>NTDB_id=945404 V4Q90_RS01305 WP_350534629.1 292803..293144(+) (pilZ) [Legionella pneumophila strain LEG1116]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=945404 V4Q90_RS01305 WP_350534629.1 292803..293144(+) (pilZ) [Legionella pneumophila strain LEG1116]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATMTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-100)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

1
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

1