Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V9L13_RS18745 Genome accession   NZ_CP146986
Coordinates   4144856..4145260 (-) Length   134 a.a.
NCBI ID   WP_003229093.1    Uniprot ID   -
Organism   Pseudomonas sp. RSB 5.4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4139856..4150260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9L13_RS18730 (V9L13_18730) - 4141625..4143679 (-) 2055 WP_338800228.1 methyl-accepting chemotaxis protein -
  V9L13_RS18735 (V9L13_18735) - 4143880..4144419 (-) 540 WP_003229089.1 chemotaxis protein CheW -
  V9L13_RS18740 (V9L13_18740) pilH 4144430..4144795 (-) 366 WP_003229091.1 twitching motility response regulator PilH -
  V9L13_RS18745 (V9L13_18745) pilG 4144856..4145260 (-) 405 WP_003229093.1 twitching motility response regulator PilG Regulator
  V9L13_RS18750 (V9L13_18750) gshB 4145486..4146457 (+) 972 WP_338800229.1 glutathione synthase -
  V9L13_RS18755 (V9L13_18755) - 4146565..4147464 (+) 900 WP_003229097.1 energy transducer TonB -
  V9L13_RS18760 (V9L13_18760) - 4147678..4148250 (+) 573 WP_201136352.1 YqgE/AlgH family protein -
  V9L13_RS18765 (V9L13_18765) ruvX 4148250..4148687 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  V9L13_RS18770 (V9L13_18770) pyrR 4148768..4149274 (+) 507 WP_338800230.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14617.02 Da        Isoelectric Point: 6.7107

>NTDB_id=945381 V9L13_RS18745 WP_003229093.1 4144856..4145260(-) (pilG) [Pseudomonas sp. RSB 5.4]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=945381 V9L13_RS18745 WP_003229093.1 4144856..4145260(-) (pilG) [Pseudomonas sp. RSB 5.4]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACACTGTT
GAAAAATGTGGGCTGCGAAGTCATCACGGCGATTGATGGTTTTGACGCTTTGGCGAAGATCGCCGACCACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCGACGCGATTCAGGCCCACGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694