Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SGN16_RS27550 Genome accession   NZ_CP146985
Coordinates   6207230..6207658 (-) Length   142 a.a.
NCBI ID   WP_210641764.1    Uniprot ID   -
Organism   Pseudomonas sp. G166     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6202230..6212658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGN16_RS27535 - 6204049..6206109 (-) 2061 WP_210641759.1 methyl-accepting chemotaxis protein -
  SGN16_RS27540 - 6206268..6206807 (-) 540 WP_335944596.1 chemotaxis protein CheW -
  SGN16_RS27545 pilH 6206818..6207183 (-) 366 WP_210641763.1 twitching motility response regulator PilH -
  SGN16_RS27550 pilG 6207230..6207658 (-) 429 WP_210641764.1 response regulator Regulator
  SGN16_RS27555 gshB 6207883..6208836 (+) 954 WP_210641766.1 glutathione synthase -
  SGN16_RS27560 - 6208914..6209810 (+) 897 WP_335944597.1 energy transducer TonB -
  SGN16_RS27565 - 6209945..6211084 (+) 1140 WP_335944598.1 RHS repeat-associated core domain-containing protein -
  SGN16_RS27570 - 6211234..6211803 (+) 570 WP_335944599.1 YqgE/AlgH family protein -
  SGN16_RS27575 ruvX 6211803..6212240 (+) 438 WP_109752386.1 Holliday junction resolvase RuvX -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15521.96 Da        Isoelectric Point: 7.4360

>NTDB_id=945356 SGN16_RS27550 WP_210641764.1 6207230..6207658(-) (pilG) [Pseudomonas sp. G166]
MAEHPTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFTAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=945356 SGN16_RS27550 WP_210641764.1 6207230..6207658(-) (pilG) [Pseudomonas sp. G166]
ATGGCAGAGCATCCGACGCAACAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAAACCTTGCTGCGCAACGTGGGGTGCGAGGTGATCACGGCCATTGACGGCTTCGATGCGCTGGCCAAGATCGCCG
ATCATCACCCGGGCATTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCCCTGATCAAGAAC
AACAGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGTGCGATACAAGCCCATGTTCCGGGCTTTA
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.119

83.099

0.641