Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACFXAC_RS08060 | Genome accession | NZ_CP170720 |
| Coordinates | 1615116..1615478 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain JP5006 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1610116..1620478
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFXAC_RS08030 (ACFXAC_08030) | flgD | 1611019..1611459 (+) | 441 | WP_015239855.1 | flagellar hook assembly protein FlgD | - |
| ACFXAC_RS08035 (ACFXAC_08035) | flgG | 1611484..1612260 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| ACFXAC_RS08040 (ACFXAC_08040) | - | 1612300..1612515 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| ACFXAC_RS08045 (ACFXAC_08045) | fliL | 1612512..1612931 (+) | 420 | WP_014417773.1 | flagellar basal body-associated protein FliL | - |
| ACFXAC_RS08050 (ACFXAC_08050) | fliM | 1612965..1613963 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| ACFXAC_RS08055 (ACFXAC_08055) | fliY | 1613953..1615089 (+) | 1137 | WP_015417472.1 | flagellar motor switch phosphatase FliY | - |
| ACFXAC_RS08060 (ACFXAC_08060) | pilH | 1615116..1615478 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| ACFXAC_RS08065 (ACFXAC_08065) | fliZ | 1615493..1616146 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| ACFXAC_RS08070 (ACFXAC_08070) | fliP | 1616139..1616804 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| ACFXAC_RS08075 (ACFXAC_08075) | fliQ | 1616819..1617088 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| ACFXAC_RS08080 (ACFXAC_08080) | fliR | 1617095..1617874 (+) | 780 | WP_017417780.1 | flagellar biosynthetic protein FliR | - |
| ACFXAC_RS08085 (ACFXAC_08085) | flhB | 1617874..1618953 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=945335 ACFXAC_RS08060 WP_003154238.1 1615116..1615478(+) (pilH) [Bacillus amyloliquefaciens strain JP5006]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=945335 ACFXAC_RS08060 WP_003154238.1 1615116..1615478(+) (pilH) [Bacillus amyloliquefaciens strain JP5006]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |