Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   WAA16_RS05545 Genome accession   NZ_CP146984
Coordinates   1136722..1137387 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain S9     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131722..1142387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WAA16_RS05515 (WAA16_05515) - 1132047..1133135 (+) 1089 WP_095285016.1 ABC transporter ATP-binding protein -
  WAA16_RS05520 (WAA16_05520) - 1133137..1134057 (+) 921 WP_034663259.1 ATP-binding cassette domain-containing protein -
  WAA16_RS05525 (WAA16_05525) - 1134163..1134450 (+) 288 WP_060596004.1 hypothetical protein -
  WAA16_RS05530 (WAA16_05530) - 1134587..1135165 (+) 579 WP_060596005.1 GNAT family N-acetyltransferase -
  WAA16_RS05535 (WAA16_05535) spxA 1135359..1135754 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  WAA16_RS05540 (WAA16_05540) - 1135794..1136459 (-) 666 WP_060596006.1 TerC family protein -
  WAA16_RS05545 (WAA16_05545) mecA 1136722..1137387 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  WAA16_RS05550 (WAA16_05550) cls 1137473..1138993 (+) 1521 WP_088003078.1 cardiolipin synthase -
  WAA16_RS05555 (WAA16_05555) - 1139155..1140315 (+) 1161 WP_106072664.1 competence protein CoiA family protein -
  WAA16_RS05560 (WAA16_05560) pepF 1140530..1142356 (+) 1827 WP_282959334.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=945290 WAA16_RS05545 WP_012009573.1 1136722..1137387(+) (mecA) [Bacillus pumilus strain S9]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=945290 WAA16_RS05545 WP_012009573.1 1136722..1137387(+) (mecA) [Bacillus pumilus strain S9]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAAATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCTCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774