Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACFXAA_RS10785 Genome accession   NZ_CP170717
Coordinates   2264805..2265887 (-) Length   360 a.a.
NCBI ID   WP_007410390.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP5014     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2259805..2270887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAA_RS10760 (ACFXAA_10760) cysE 2259904..2260557 (-) 654 WP_007410393.1 serine O-acetyltransferase -
  ACFXAA_RS10765 (ACFXAA_10765) gltX 2260868..2262319 (-) 1452 WP_007410392.1 glutamate--tRNA ligase -
  ACFXAA_RS10770 (ACFXAA_10770) ispF 2262411..2262887 (-) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  ACFXAA_RS10775 (ACFXAA_10775) ispD 2262880..2263578 (-) 699 WP_061861085.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  ACFXAA_RS10780 (ACFXAA_10780) - 2263591..2264691 (-) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  ACFXAA_RS10785 (ACFXAA_10785) disA 2264805..2265887 (-) 1083 WP_007410390.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACFXAA_RS10790 (ACFXAA_10790) radA/sms 2265891..2267270 (-) 1380 WP_015416671.1 DNA repair protein RadA Machinery gene
  ACFXAA_RS10795 (ACFXAA_10795) clpC 2267364..2269796 (-) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  ACFXAA_RS10800 (ACFXAA_10800) - 2269793..2270884 (-) 1092 WP_015416670.1 protein arginine kinase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.26 Da        Isoelectric Point: 5.7630

>NTDB_id=945046 ACFXAA_RS10785 WP_007410390.1 2264805..2265887(-) (disA) [Bacillus amyloliquefaciens strain JP5014]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAKKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=945046 ACFXAA_RS10785 WP_007410390.1 2264805..2265887(-) (disA) [Bacillus amyloliquefaciens strain JP5014]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCGCTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACCAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTCGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.167

100

0.942