Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R9B17_RS03090 | Genome accession | NZ_AP028399 |
| Coordinates | 603275..603658 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-11515 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 598275..608658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9B17_RS03070 (B11515_06130) | - | 598354..600288 (-) | 1935 | WP_317739110.1 | RNB domain-containing ribonuclease | - |
| R9B17_RS03075 (B11515_06140) | ilvC | 600407..601429 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| R9B17_RS03080 (B11515_06150) | - | 601433..602515 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R9B17_RS03085 (B11515_06160) | dprA | 602505..603278 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R9B17_RS03090 (B11515_06170) | dprB | 603275..603658 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R9B17_RS03095 (B11515_06180) | - | 603687..604526 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R9B17_RS03100 (B11515_06190) | msrA | 604701..605198 (-) | 498 | WP_032586473.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R9B17_RS03105 (B11515_06200) | ppa | 605240..605758 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| R9B17_RS03110 (B11515_06210) | adk | 605768..606346 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R9B17_RS03115 (B11515_06220) | aspS | 606343..608094 (-) | 1752 | WP_032586472.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=94503 R9B17_RS03090 WP_002852281.1 603275..603658(+) (dprB) [Campylobacter jejuni strain BCH-11515]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=94503 R9B17_RS03090 WP_002852281.1 603275..603658(+) (dprB) [Campylobacter jejuni strain BCH-11515]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |