Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACFXAD_RS00415 Genome accession   NZ_CP170653
Coordinates   63247..64329 (-) Length   360 a.a.
NCBI ID   WP_007410390.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP5011     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 58247..69329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAD_RS00390 (ACFXAD_00390) cysE 58346..58999 (-) 654 WP_007410393.1 serine O-acetyltransferase -
  ACFXAD_RS00395 (ACFXAD_00395) gltX 59310..60761 (-) 1452 WP_053573808.1 glutamate--tRNA ligase -
  ACFXAD_RS00400 (ACFXAD_00400) ispF 60853..61329 (-) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  ACFXAD_RS00405 (ACFXAD_00405) ispD 61322..62020 (-) 699 WP_015239038.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  ACFXAD_RS00410 (ACFXAD_00410) - 62033..63133 (-) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  ACFXAD_RS00415 (ACFXAD_00415) disA 63247..64329 (-) 1083 WP_007410390.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACFXAD_RS00420 (ACFXAD_00420) radA/sms 64333..65712 (-) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  ACFXAD_RS00425 (ACFXAD_00425) clpC 65806..68241 (-) 2436 WP_053573807.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  ACFXAD_RS00430 (ACFXAD_00430) - 68238..69329 (-) 1092 WP_003156398.1 protein arginine kinase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.26 Da        Isoelectric Point: 5.7630

>NTDB_id=944820 ACFXAD_RS00415 WP_007410390.1 63247..64329(-) (disA) [Bacillus amyloliquefaciens strain JP5011]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAKKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=944820 ACFXAD_RS00415 WP_007410390.1 63247..64329(-) (disA) [Bacillus amyloliquefaciens strain JP5011]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTCTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAAGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGACTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACCAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.167

100

0.942