Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACFW99_RS08425 | Genome accession | NZ_CP170651 |
| Coordinates | 1674767..1675129 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain JP5025 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1669767..1680129
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFW99_RS08395 (ACFW99_08395) | flgD | 1670670..1671110 (+) | 441 | WP_015417470.1 | flagellar hook assembly protein FlgD | - |
| ACFW99_RS08400 (ACFW99_08400) | flgG | 1671135..1671911 (+) | 777 | WP_015417471.1 | flagellar basal body rod protein FlgG | - |
| ACFW99_RS08405 (ACFW99_08405) | - | 1671951..1672166 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| ACFW99_RS08410 (ACFW99_08410) | fliL | 1672163..1672582 (+) | 420 | WP_014417773.1 | flagellar basal body-associated protein FliL | - |
| ACFW99_RS08415 (ACFW99_08415) | fliM | 1672616..1673614 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| ACFW99_RS08420 (ACFW99_08420) | fliY | 1673604..1674740 (+) | 1137 | WP_039251507.1 | flagellar motor switch phosphatase FliY | - |
| ACFW99_RS08425 (ACFW99_08425) | pilH | 1674767..1675129 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| ACFW99_RS08430 (ACFW99_08430) | fliZ | 1675144..1675797 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| ACFW99_RS08435 (ACFW99_08435) | fliP | 1675790..1676455 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| ACFW99_RS08440 (ACFW99_08440) | fliQ | 1676470..1676739 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| ACFW99_RS08445 (ACFW99_08445) | fliR | 1676746..1677525 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| ACFW99_RS08450 (ACFW99_08450) | flhB | 1677525..1678604 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=944736 ACFW99_RS08425 WP_003154238.1 1674767..1675129(+) (pilH) [Bacillus amyloliquefaciens strain JP5025]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=944736 ACFW99_RS08425 WP_003154238.1 1674767..1675129(+) (pilH) [Bacillus amyloliquefaciens strain JP5025]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |