Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V9W58_RS07440 Genome accession   NZ_CP146764
Coordinates   1414070..1414534 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain AP202     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1409070..1419534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W58_RS07420 (V9W58_07420) - 1409551..1411371 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  V9W58_RS07425 (V9W58_07425) - 1411396..1412565 (-) 1170 WP_007611083.1 aminotransferase A -
  V9W58_RS07430 (V9W58_07430) - 1412766..1412927 (-) 162 WP_007409608.1 hypothetical protein -
  V9W58_RS07435 (V9W58_07435) cheV 1413116..1414027 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  V9W58_RS07440 (V9W58_07440) kre 1414070..1414534 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V9W58_RS07445 (V9W58_07445) - 1414657..1415949 (-) 1293 WP_251248495.1 MFS transporter -
  V9W58_RS07450 (V9W58_07450) - 1416025..1416519 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  V9W58_RS07455 (V9W58_07455) - 1416594..1417457 (-) 864 WP_251248494.1 metallophosphoesterase -
  V9W58_RS07460 (V9W58_07460) fadH 1417602..1418366 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  V9W58_RS07465 (V9W58_07465) - 1418531..1419027 (+) 497 Protein_1412 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=944573 V9W58_RS07440 WP_003154622.1 1414070..1414534(-) (kre) [Bacillus velezensis strain AP202]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=944573 V9W58_RS07440 WP_003154622.1 1414070..1414534(-) (kre) [Bacillus velezensis strain AP202]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929