Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V9W58_RS05790 Genome accession   NZ_CP146764
Coordinates   1120348..1120539 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain AP202     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115348..1125539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W58_RS05760 (V9W58_05760) argF 1116200..1117171 (+) 972 WP_072588978.1 ornithine carbamoyltransferase -
  V9W58_RS05765 (V9W58_05765) - 1117247..1117426 (+) 180 WP_003155070.1 YjzC family protein -
  V9W58_RS05770 (V9W58_05770) - 1117463..1117648 (-) 186 WP_007409129.1 YjzD family protein -
  V9W58_RS05775 (V9W58_05775) - 1117909..1118643 (+) 735 WP_251248638.1 hypothetical protein -
  V9W58_RS05780 (V9W58_05780) - 1118726..1119292 (+) 567 WP_251248637.1 hypothetical protein -
  V9W58_RS05785 (V9W58_05785) med 1119382..1120335 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  V9W58_RS05790 (V9W58_05790) comZ 1120348..1120539 (+) 192 WP_003155061.1 ComZ family protein Regulator
  V9W58_RS05795 (V9W58_05795) - 1120568..1120786 (-) 219 WP_007409123.1 hypothetical protein -
  V9W58_RS05800 (V9W58_05800) - 1120954..1121892 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  V9W58_RS05805 (V9W58_05805) fabF 1121915..1123153 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  V9W58_RS05810 (V9W58_05810) - 1123236..1124021 (+) 786 WP_251248636.1 DUF2268 domain-containing protein -
  V9W58_RS05815 (V9W58_05815) - 1124195..1125181 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=944566 V9W58_RS05790 WP_003155061.1 1120348..1120539(+) (comZ) [Bacillus velezensis strain AP202]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=944566 V9W58_RS05790 WP_003155061.1 1120348..1120539(+) (comZ) [Bacillus velezensis strain AP202]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794