Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   V9W58_RS01835 Genome accession   NZ_CP146764
Coordinates   351966..352130 (+) Length   54 a.a.
NCBI ID   WP_285866024.1    Uniprot ID   -
Organism   Bacillus velezensis strain AP202     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 346966..357130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W58_RS01830 (V9W58_01830) srfAB 348857..351949 (+) 3093 Protein_320 surfactin non-ribosomal peptide synthetase SrfAB -
  V9W58_RS01835 (V9W58_01835) comS 351966..352130 (+) 165 WP_285866024.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6200.21 Da        Isoelectric Point: 12.0559

>NTDB_id=944552 V9W58_RS01835 WP_285866024.1 351966..352130(+) (comS) [Bacillus velezensis strain AP202]
MRARRSSSLNRSDKRLIRSIILFLQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=944552 V9W58_RS01835 WP_285866024.1 351966..352130(+) (comS) [Bacillus velezensis strain AP202]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCTTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5