Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   V9W62_RS01805 Genome accession   NZ_CP146763
Coordinates   347358..347522 (+) Length   54 a.a.
NCBI ID   WP_272914175.1    Uniprot ID   -
Organism   Bacillus velezensis strain AP81     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 342358..352522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W62_RS01800 (V9W62_01800) srfAB 344249..347341 (+) 3093 Protein_314 surfactin non-ribosomal peptide synthetase SrfAB -
  V9W62_RS01805 (V9W62_01805) comS 347358..347522 (+) 165 WP_272914175.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6244.27 Da        Isoelectric Point: 12.0559

>NTDB_id=944477 V9W62_RS01805 WP_272914175.1 347358..347522(+) (comS) [Bacillus velezensis strain AP81]
MRARRSSSLNRFDKRLIRSIILFPQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=944477 V9W62_RS01805 WP_272914175.1 347358..347522(+) (comS) [Bacillus velezensis strain AP81]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATTCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5