Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   V9W59_RS07125 Genome accession   NZ_CP146762
Coordinates   1434442..1435014 (+) Length   190 a.a.
NCBI ID   WP_025092353.1    Uniprot ID   A0A5C0WCR7
Organism   Bacillus safensis strain JJ1041     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1429442..1440014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W59_RS07095 (V9W59_07095) dapD 1429557..1430267 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  V9W59_RS07100 (V9W59_07100) - 1430350..1431480 (+) 1131 WP_044331971.1 N-acetyldiaminopimelate deacetylase -
  V9W59_RS07105 (V9W59_07105) - 1431531..1431773 (+) 243 WP_024424725.1 YkuS family protein -
  V9W59_RS07110 (V9W59_07110) - 1431796..1432605 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  V9W59_RS07115 (V9W59_07115) ahpA 1432878..1433420 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  V9W59_RS07120 (V9W59_07120) - 1433503..1433961 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  V9W59_RS07125 (V9W59_07125) rok 1434442..1435014 (+) 573 WP_025092353.1 transcriptional regulator Rok Regulator
  V9W59_RS07130 (V9W59_07130) - 1435062..1435979 (-) 918 WP_034623329.1 hypothetical protein -
  V9W59_RS07135 (V9W59_07135) - 1436065..1436646 (+) 582 WP_041117250.1 molybdenum cofactor guanylyltransferase -
  V9W59_RS07140 (V9W59_07140) - 1436677..1437693 (+) 1017 WP_044335906.1 thiazole biosynthesis adenylyltransferase ThiF -
  V9W59_RS07145 (V9W59_07145) glp 1437703..1438980 (+) 1278 WP_187470533.1 gephyrin-like molybdotransferase Glp -
  V9W59_RS07150 (V9W59_07150) mobB 1438962..1439486 (+) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  V9W59_RS07155 (V9W59_07155) - 1439483..1439974 (+) 492 WP_024424732.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21547.49 Da        Isoelectric Point: 9.7309

>NTDB_id=944433 V9W59_RS07125 WP_025092353.1 1434442..1435014(+) (rok) [Bacillus safensis strain JJ1041]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=944433 V9W59_RS07125 WP_025092353.1 1434442..1435014(+) (rok) [Bacillus safensis strain JJ1041]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAAACACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WCR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8