Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   V9W61_RS06940 Genome accession   NZ_CP146761
Coordinates   1373583..1374164 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JJ1138     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368583..1379164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W61_RS06915 (V9W61_06915) - 1369249..1370427 (+) 1179 WP_052141832.1 N-acetyldiaminopimelate deacetylase -
  V9W61_RS06920 (V9W61_06920) - 1370478..1370720 (+) 243 WP_024424725.1 YkuS family protein -
  V9W61_RS06925 (V9W61_06925) - 1370743..1371552 (-) 810 WP_268362110.1 mechanosensitive ion channel family protein -
  V9W61_RS06930 (V9W61_06930) ahpA 1371824..1372366 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  V9W61_RS06935 (V9W61_06935) - 1372643..1373101 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  V9W61_RS06940 (V9W61_06940) rok 1373583..1374164 (+) 582 WP_007498648.1 hypothetical protein Regulator
  V9W61_RS06945 (V9W61_06945) - 1374227..1375144 (-) 918 WP_335352799.1 sigmaE regulated sporulation protein -
  V9W61_RS06950 (V9W61_06950) - 1375228..1375809 (+) 582 WP_335352798.1 molybdenum cofactor guanylyltransferase -
  V9W61_RS06955 (V9W61_06955) - 1375839..1376855 (+) 1017 WP_335352797.1 thiazole biosynthesis adenylyltransferase ThiF -
  V9W61_RS06960 (V9W61_06960) glp 1376865..1378139 (+) 1275 WP_178897113.1 gephyrin-like molybdotransferase Glp -
  V9W61_RS06965 (V9W61_06965) mobB 1378121..1378648 (+) 528 WP_041507370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  V9W61_RS06970 (V9W61_06970) - 1378641..1379132 (+) 492 WP_212362510.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=944372 V9W61_RS06940 WP_007498648.1 1373583..1374164(+) (rok) [Bacillus altitudinis strain JJ1138]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=944372 V9W61_RS06940 WP_007498648.1 1373583..1374164(+) (rok) [Bacillus altitudinis strain JJ1138]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782