Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   V9W61_RS05590 Genome accession   NZ_CP146761
Coordinates   1125801..1126766 (+) Length   321 a.a.
NCBI ID   WP_017360174.1    Uniprot ID   A0A6I5SIG8
Organism   Bacillus altitudinis strain JJ1138     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120801..1131766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W61_RS05560 (V9W61_05560) argF 1121124..1122074 (+) 951 WP_057079702.1 ornithine carbamoyltransferase -
  V9W61_RS05565 (V9W61_05565) - 1122178..1122357 (+) 180 WP_008348517.1 YjzC family protein -
  V9W61_RS05570 (V9W61_05570) - 1122527..1123792 (+) 1266 WP_007499050.1 MFS transporter -
  V9W61_RS05575 (V9W61_05575) - 1123912..1124106 (-) 195 WP_024720055.1 YjzD family protein -
  V9W61_RS05580 (V9W61_05580) - 1124319..1125059 (+) 741 WP_007499048.1 hypothetical protein -
  V9W61_RS05585 (V9W61_05585) - 1125135..1125710 (+) 576 WP_178930029.1 nad binding enzyme -
  V9W61_RS05590 (V9W61_05590) med 1125801..1126766 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  V9W61_RS05595 (V9W61_05595) comZ 1126778..1126975 (+) 198 WP_008348507.1 ComZ family protein Regulator
  V9W61_RS05600 (V9W61_05600) - 1126986..1127219 (-) 234 WP_008348506.1 hypothetical protein -
  V9W61_RS05605 (V9W61_05605) - 1127389..1128327 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  V9W61_RS05610 (V9W61_05610) fabF 1128349..1129590 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  V9W61_RS05615 (V9W61_05615) - 1129668..1130462 (+) 795 WP_056407963.1 DUF2268 domain-containing protein -
  V9W61_RS05620 (V9W61_05620) - 1130633..1131613 (+) 981 WP_056407962.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35889.89 Da        Isoelectric Point: 5.9297

>NTDB_id=944362 V9W61_RS05590 WP_017360174.1 1125801..1126766(+) (med) [Bacillus altitudinis strain JJ1138]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=944362 V9W61_RS05590 WP_017360174.1 1125801..1126766(+) (med) [Bacillus altitudinis strain JJ1138]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I5SIG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632