Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V9W61_RS05215 Genome accession   NZ_CP146761
Coordinates   1045074..1046024 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JJ1138     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1040074..1051024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W61_RS05195 (V9W61_05195) - 1041314..1041796 (+) 483 WP_008348662.1 hypothetical protein -
  V9W61_RS05200 (V9W61_05200) - 1041827..1043266 (-) 1440 WP_251210852.1 PLP-dependent aminotransferase family protein -
  V9W61_RS05205 (V9W61_05205) - 1043409..1044578 (+) 1170 WP_251210851.1 MFS transporter -
  V9W61_RS05210 (V9W61_05210) - 1044641..1044919 (+) 279 WP_039167440.1 barstar family protein -
  V9W61_RS05215 (V9W61_05215) ceuB 1045074..1046024 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  V9W61_RS05220 (V9W61_05220) - 1046017..1046967 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  V9W61_RS05225 (V9W61_05225) - 1046958..1047716 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  V9W61_RS05230 (V9W61_05230) - 1047739..1048683 (+) 945 WP_144678945.1 siderophore ABC transporter substrate-binding protein -
  V9W61_RS05235 (V9W61_05235) - 1048823..1049779 (+) 957 WP_007499147.1 LCP family protein -
  V9W61_RS05240 (V9W61_05240) - 1050012..1050446 (-) 435 WP_039167431.1 hypothetical protein -
  V9W61_RS05245 (V9W61_05245) - 1050532..1050894 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=944359 V9W61_RS05215 WP_039167438.1 1045074..1046024(+) (ceuB) [Bacillus altitudinis strain JJ1138]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=944359 V9W61_RS05215 WP_039167438.1 1045074..1046024(+) (ceuB) [Bacillus altitudinis strain JJ1138]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494