Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V9W63_RS07115 Genome accession   NZ_CP146760
Coordinates   1364080..1364544 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JJ334     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359080..1369544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W63_RS07095 (V9W63_07095) - 1359561..1361381 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  V9W63_RS07100 (V9W63_07100) - 1361406..1362575 (-) 1170 WP_007611083.1 aminotransferase A -
  V9W63_RS07105 (V9W63_07105) - 1362776..1362937 (-) 162 WP_007409608.1 hypothetical protein -
  V9W63_RS07110 (V9W63_07110) cheV 1363126..1364037 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  V9W63_RS07115 (V9W63_07115) kre 1364080..1364544 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V9W63_RS07120 (V9W63_07120) - 1364667..1365959 (-) 1293 WP_007611093.1 MFS transporter -
  V9W63_RS07125 (V9W63_07125) - 1366035..1366529 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  V9W63_RS07130 (V9W63_07130) - 1366604..1367467 (-) 864 WP_007409612.1 metallophosphoesterase -
  V9W63_RS07135 (V9W63_07135) fadH 1367612..1368376 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  V9W63_RS07140 (V9W63_07140) - 1368490..1369038 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=944300 V9W63_RS07115 WP_003154622.1 1364080..1364544(-) (kre) [Bacillus velezensis strain JJ334]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=944300 V9W63_RS07115 WP_003154622.1 1364080..1364544(-) (kre) [Bacillus velezensis strain JJ334]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGTAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929