Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACFIOK_RS03565 Genome accession   NZ_CP170434
Coordinates   715830..716546 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   P0A0I7
Organism   Staphylococcus aureus strain t315     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 710830..721546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOK_RS03545 - 711922..712872 (+) 951 WP_000790332.1 LacI family DNA-binding transcriptional regulator -
  ACFIOK_RS03550 - 713021..714505 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  ACFIOK_RS03555 - 714502..715461 (+) 960 WP_001253314.1 carbohydrate kinase family protein -
  ACFIOK_RS03560 - 715649..715758 (-) 110 Protein_697 hypothetical protein -
  ACFIOK_RS03565 agrA 715830..716546 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACFIOK_RS03570 agrC 716565..717857 (-) 1293 WP_001657119.1 quorum-sensing sensor histidine kinase AgrC -
  ACFIOK_RS03575 agrD 717882..718022 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  ACFIOK_RS03580 agrB 718019..718588 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  ACFIOK_RS03585 hld 718878..718958 (+) 81 WP_000046022.1 delta-hemolysin -
  ACFIOK_RS03590 - 719555..720340 (-) 786 WP_000867949.1 carbon-nitrogen family hydrolase -
  ACFIOK_RS03595 - 720701..721327 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=944295 ACFIOK_RS03565 WP_000688492.1 715830..716546(-) (agrA) [Staphylococcus aureus strain t315]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=944295 ACFIOK_RS03565 WP_000688492.1 715830..716546(-) (agrA) [Staphylococcus aureus strain t315]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3BS1
  PDB 4G4K

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1