Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   V9W60_RS06975 Genome accession   NZ_CP146759
Coordinates   1375913..1376494 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JJ61     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1370913..1381494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W60_RS06950 (V9W60_06950) - 1371574..1372752 (+) 1179 WP_159159592.1 N-acetyldiaminopimelate deacetylase -
  V9W60_RS06955 (V9W60_06955) - 1372803..1373045 (+) 243 WP_159160150.1 YkuS family protein -
  V9W60_RS06960 (V9W60_06960) - 1373068..1373877 (-) 810 WP_159159593.1 mechanosensitive ion channel family protein -
  V9W60_RS06965 (V9W60_06965) ahpA 1374149..1374691 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  V9W60_RS06970 (V9W60_06970) - 1374968..1375426 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  V9W60_RS06975 (V9W60_06975) rok 1375913..1376494 (+) 582 WP_007498648.1 hypothetical protein Regulator
  V9W60_RS06980 (V9W60_06980) - 1376557..1377474 (-) 918 WP_159159594.1 sigmaE regulated sporulation protein -
  V9W60_RS06985 (V9W60_06985) - 1377558..1378139 (+) 582 WP_172793300.1 molybdenum cofactor guanylyltransferase -
  V9W60_RS06990 (V9W60_06990) - 1378169..1379185 (+) 1017 WP_159159595.1 thiazole biosynthesis adenylyltransferase ThiF -
  V9W60_RS06995 (V9W60_06995) glp 1379195..1380469 (+) 1275 WP_186365888.1 gephyrin-like molybdotransferase Glp -
  V9W60_RS07000 (V9W60_07000) mobB 1380451..1380975 (+) 525 WP_159159596.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  V9W60_RS07005 (V9W60_07005) - 1380972..1381463 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=944234 V9W60_RS06975 WP_007498648.1 1375913..1376494(+) (rok) [Bacillus altitudinis strain JJ61]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=944234 V9W60_RS06975 WP_007498648.1 1375913..1376494(+) (rok) [Bacillus altitudinis strain JJ61]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782