Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V9W60_RS05270 Genome accession   NZ_CP146759
Coordinates   1051704..1052654 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain JJ61     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1046704..1057654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W60_RS05250 (V9W60_05250) - 1047944..1048426 (+) 483 WP_338704855.1 hypothetical protein -
  V9W60_RS05255 (V9W60_05255) - 1048457..1049896 (-) 1440 WP_338704856.1 PLP-dependent aminotransferase family protein -
  V9W60_RS05260 (V9W60_05260) - 1050039..1051208 (+) 1170 WP_327855374.1 MFS transporter -
  V9W60_RS05265 (V9W60_05265) - 1051271..1051549 (+) 279 WP_338704857.1 barstar family protein -
  V9W60_RS05270 (V9W60_05270) ceuB 1051704..1052654 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  V9W60_RS05275 (V9W60_05275) - 1052647..1053597 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  V9W60_RS05280 (V9W60_05280) - 1053588..1054346 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  V9W60_RS05285 (V9W60_05285) - 1054369..1055313 (+) 945 WP_045034716.1 siderophore ABC transporter substrate-binding protein -
  V9W60_RS05290 (V9W60_05290) - 1055651..1056607 (+) 957 WP_007499147.1 LCP family protein -
  V9W60_RS05295 (V9W60_05295) - 1056642..1057076 (-) 435 WP_039167431.1 hypothetical protein -
  V9W60_RS05300 (V9W60_05300) - 1057162..1057524 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=944221 V9W60_RS05270 WP_017366964.1 1051704..1052654(+) (ceuB) [Bacillus altitudinis strain JJ61]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=944221 V9W60_RS05270 WP_017366964.1 1051704..1052654(+) (ceuB) [Bacillus altitudinis strain JJ61]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAGATGGC
GATTGCATTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGAGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGTGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTTG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494