Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   V9W60_RS04240 Genome accession   NZ_CP146759
Coordinates   858054..858845 (+) Length   263 a.a.
NCBI ID   WP_159145525.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JJ61     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 853054..863845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W60_RS04205 (V9W60_04205) - 853143..853691 (+) 549 WP_035703746.1 thioredoxin family protein -
  V9W60_RS04210 (V9W60_04210) - 854030..854497 (+) 468 WP_024720282.1 DUF393 domain-containing protein -
  V9W60_RS04215 (V9W60_04215) - 854533..855789 (-) 1257 WP_008341668.1 transcriptional regulator -
  V9W60_RS04220 (V9W60_04220) - 856060..856647 (+) 588 WP_236551962.1 nitroreductase -
  V9W60_RS04225 (V9W60_04225) - 856682..856837 (-) 156 WP_008341997.1 YfhD family protein -
  V9W60_RS04230 (V9W60_04230) - 856899..857009 (-) 111 WP_017358836.1 YfhE family protein -
  V9W60_RS04235 (V9W60_04235) - 857062..857958 (-) 897 WP_338704802.1 TIGR01777 family oxidoreductase -
  V9W60_RS04240 (V9W60_04240) recX 858054..858845 (+) 792 WP_159145525.1 recombination regulator RecX Regulator
  V9W60_RS04245 (V9W60_04245) - 858849..859163 (+) 315 WP_041090747.1 YfhH family protein -
  V9W60_RS04250 (V9W60_04250) - 859390..859563 (-) 174 WP_003217811.1 YpzG family protein -
  V9W60_RS04255 (V9W60_04255) - 859589..859738 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  V9W60_RS04260 (V9W60_04260) - 859855..860127 (+) 273 WP_017366871.1 YfhJ family protein -
  V9W60_RS04265 (V9W60_04265) - 860429..861412 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30642.09 Da        Isoelectric Point: 7.0789

>NTDB_id=944216 V9W60_RS04240 WP_159145525.1 858054..858845(+) (recX) [Bacillus altitudinis strain JJ61]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDIIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=944216 V9W60_RS04240 WP_159145525.1 858054..858845(+) (recX) [Bacillus altitudinis strain JJ61]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATATAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635