Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACFIOD_RS13535 Genome accession   NZ_CP170429
Coordinates   2713799..2714599 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain t1531     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2708799..2719599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOD_RS13515 - 2710012..2710104 (-) 93 WP_001790000.1 hypothetical protein -
  ACFIOD_RS13520 - 2710068..2710202 (+) 135 WP_001790628.1 hypothetical protein -
  ACFIOD_RS13525 rlmH 2710407..2710886 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACFIOD_RS13530 adsA 2711254..2713572 (-) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  ACFIOD_RS13535 vicX 2713799..2714599 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  ACFIOD_RS13540 - 2714988..2715776 (-) 789 WP_001104165.1 two-component system regulatory protein YycI -
  ACFIOD_RS13545 yycH 2715777..2717111 (-) 1335 WP_252576378.1 two-component system activity regulator YycH -
  ACFIOD_RS13550 walK 2717104..2718930 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=944192 ACFIOD_RS13535 WP_000088649.1 2713799..2714599(-) (vicX) [Staphylococcus aureus strain t1531]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=944192 ACFIOD_RS13535 WP_000088649.1 2713799..2714599(-) (vicX) [Staphylococcus aureus strain t1531]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474