Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOU_RS10290 Genome accession   NZ_CP170426
Coordinates   2030793..2031611 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain t1492     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2025793..2036611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOU_RS10270 - 2026886..2027863 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  ACFIOU_RS10275 - 2028124..2028960 (-) 837 WP_000886456.1 hypothetical protein -
  ACFIOU_RS10280 - 2028969..2030486 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  ACFIOU_RS10285 - 2030501..2030815 (-) 315 WP_054192765.1 YfhH family protein -
  ACFIOU_RS10290 recX 2030793..2031611 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  ACFIOU_RS10295 sgtB 2031872..2032681 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOU_RS10300 - 2033022..2033537 (-) 516 WP_410540707.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOU_RS10305 - 2033668..2033829 (-) 162 WP_001005407.1 SE1561 family protein -
  ACFIOU_RS10310 yfkAB 2034053..2035204 (+) 1152 WP_001089622.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACFIOU_RS10315 - 2035464..2035994 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=944091 ACFIOU_RS10290 WP_001124422.1 2030793..2031611(-) (recX) [Staphylococcus aureus strain t1492]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=944091 ACFIOU_RS10290 WP_001124422.1 2030793..2031611(-) (recX) [Staphylococcus aureus strain t1492]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996