Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   V7A37_RS09825 Genome accession   NZ_CP146741
Coordinates   1950928..1951971 (-) Length   347 a.a.
NCBI ID   WP_341784835.1    Uniprot ID   -
Organism   Lactococcus petauri strain L6     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1945928..1956971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7A37_RS09810 (V7A37_09810) rpsB 1945961..1946734 (-) 774 WP_003133158.1 30S ribosomal protein S2 -
  V7A37_RS09815 (V7A37_09815) - 1947007..1948047 (+) 1041 WP_019291938.1 lactonase family protein -
  V7A37_RS09820 (V7A37_09820) adhE 1948203..1950896 (+) 2694 WP_019335773.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -
  V7A37_RS09825 (V7A37_09825) sepM 1950928..1951971 (-) 1044 WP_341784835.1 SepM family pheromone-processing serine protease Regulator
  V7A37_RS09830 (V7A37_09830) coaD 1951961..1952458 (-) 498 WP_019291941.1 pantetheine-phosphate adenylyltransferase -
  V7A37_RS09835 (V7A37_09835) rsmD 1952448..1952987 (-) 540 WP_061414970.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V7A37_RS09840 (V7A37_09840) - 1953086..1954432 (-) 1347 WP_003133148.1 glucose-6-phosphate isomerase -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 37814.13 Da        Isoelectric Point: 7.3452

>NTDB_id=943986 V7A37_RS09825 WP_341784835.1 1950928..1951971(-) (sepM) [Lactococcus petauri strain L6]
MKNEKIKKYKKLKLFFAIALPLLIVVGLFFPLPYYIEQPGGTIPVNQMVDVAGKKDEHKGNFYLTTVEMVRANAASMLYS
KSNSFATVVSSEEMTGGMTNQQFDLVNQFYMQTAQNTAIYQAFKLAGKPYEMKYQGVYVLSITEDSTFKNDLQLSDTITA
VNGHTFKSSTEMIDYVSQQKVGDSVTIKYTRVDGSNHEATGKYIKLSNGKTGIGIGLVDHTQVVTDPKVKIDAGSIGGPS
AGMMFTLEIYSQITGKDLRQGREIAGTGTINEDGSIGQIGGVDKKVATASNAGAKIFLCPDETEEQTKASGTTNNYTDAL
AAAKKLNTDMKIVPVKTIQDALDYLEK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=943986 V7A37_RS09825 WP_341784835.1 1950928..1951971(-) (sepM) [Lactococcus petauri strain L6]
ATGAAAAATGAAAAAATAAAAAAGTATAAAAAACTAAAGCTATTCTTTGCCATCGCGCTACCGCTTCTTATTGTAGTGGG
TTTATTCTTCCCCTTACCTTACTATATCGAGCAGCCAGGAGGAACCATTCCAGTTAACCAAATGGTTGATGTTGCAGGGA
AAAAAGACGAACATAAAGGCAACTTTTATTTAACGACAGTTGAAATGGTTCGCGCCAATGCAGCAAGTATGCTTTATTCC
AAGTCGAACTCTTTTGCCACTGTTGTGAGTAGTGAAGAGATGACGGGTGGAATGACCAATCAGCAATTTGACTTGGTCAA
CCAGTTTTATATGCAGACAGCGCAAAACACGGCTATTTATCAGGCCTTTAAGTTGGCAGGGAAACCTTATGAGATGAAGT
ATCAAGGTGTTTATGTTTTGAGCATCACTGAGGATTCAACCTTTAAAAATGACTTACAACTTTCAGATACGATAACGGCA
GTTAATGGACATACTTTCAAATCTTCAACTGAGATGATTGATTATGTATCGCAACAAAAAGTTGGGGATAGCGTTACCAT
CAAATATACACGTGTGGATGGCAGTAATCATGAAGCCACAGGTAAGTACATTAAGTTGAGTAATGGTAAAACAGGGATTG
GTATTGGTTTAGTAGATCATACCCAGGTTGTGACAGACCCTAAAGTTAAAATCGATGCTGGAAGTATTGGCGGGCCAAGT
GCTGGTATGATGTTTACCTTGGAAATATATAGCCAAATCACAGGCAAAGATTTACGTCAAGGACGCGAAATTGCAGGTAC
TGGAACGATCAATGAGGATGGCAGCATCGGGCAAATAGGTGGCGTTGATAAAAAAGTTGCTACAGCAAGTAATGCGGGCG
CAAAAATTTTCCTTTGCCCAGATGAAACGGAAGAACAGACAAAGGCTTCTGGTACAACAAATAACTACACAGATGCGCTT
GCGGCAGCTAAAAAGTTGAATACAGATATGAAAATTGTACCTGTAAAGACGATTCAAGATGCGCTAGATTATCTCGAAAA
ATAA

Domains

Predicted by InterproScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(229-308)

PDZ domain (PDZ_2)

(134-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

48.991

100

0.49