Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACFIOL_RS07540 Genome accession   NZ_CP170416
Coordinates   1509544..1510695 (-) Length   383 a.a.
NCBI ID   WP_000020361.1    Uniprot ID   A0A0H2XEJ4
Organism   Staphylococcus aureus strain t21644     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1504544..1515695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOL_RS07520 - 1504940..1505737 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  ACFIOL_RS07525 - 1505911..1506126 (+) 216 WP_000026308.1 hypothetical protein -
  ACFIOL_RS07530 rny 1506423..1507982 (-) 1560 WP_001050913.1 ribonuclease Y -
  ACFIOL_RS07535 recA 1508336..1509379 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ACFIOL_RS07540 cinA 1509544..1510695 (-) 1152 WP_000020361.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACFIOL_RS07545 pgsA 1510922..1511500 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACFIOL_RS07550 - 1511534..1511926 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ACFIOL_RS07555 - 1511945..1512772 (-) 828 WP_000214890.1 YmfK family protein -
  ACFIOL_RS07560 ymfI 1512877..1513581 (-) 705 WP_000646231.1 elongation factor P 5-aminopentanone reductase -
  ACFIOL_RS07565 yfmH 1513581..1514867 (-) 1287 WP_410534597.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43267.55 Da        Isoelectric Point: 6.1914

>NTDB_id=943715 ACFIOL_RS07540 WP_000020361.1 1509544..1510695(-) (cinA) [Staphylococcus aureus strain t21644]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=943715 ACFIOL_RS07540 WP_000020361.1 1509544..1510695(-) (cinA) [Staphylococcus aureus strain t21644]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2XEJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431