Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOL_RS04340 Genome accession   NZ_CP170416
Coordinates   855522..856340 (+) Length   272 a.a.
NCBI ID   WP_228567755.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21644     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 850522..861340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOL_RS04315 - 851141..851671 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  ACFIOL_RS04320 yfkAB 851931..853082 (-) 1152 WP_001089622.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACFIOL_RS04325 - 853306..853467 (+) 162 WP_001005407.1 SE1561 family protein -
  ACFIOL_RS04330 - 853598..854113 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOL_RS04335 sgtB 854452..855261 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOL_RS04340 recX 855522..856340 (+) 819 WP_228567755.1 recombination regulator RecX Regulator
  ACFIOL_RS04345 - 856318..856632 (+) 315 WP_000435806.1 YfhH family protein -
  ACFIOL_RS04350 - 856647..858164 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  ACFIOL_RS04355 - 858173..859009 (+) 837 WP_000886468.1 membrane protein -
  ACFIOL_RS04360 - 859270..860247 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32242.01 Da        Isoelectric Point: 5.3867

>NTDB_id=943680 ACFIOL_RS04340 WP_228567755.1 855522..856340(+) (recX) [Staphylococcus aureus strain t21644]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYEYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=943680 ACFIOL_RS04340 WP_228567755.1 855522..856340(+) (recX) [Staphylococcus aureus strain t21644]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATGAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996