Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   ACFIOT_RS05220 Genome accession   NZ_CP170414
Coordinates   1012920..1014194 (-) Length   424 a.a.
NCBI ID   WP_054190131.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t5047     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1007920..1019194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOT_RS05205 - 1010206..1010298 (+) 93 WP_031761401.1 hypothetical protein -
  ACFIOT_RS05210 - 1010278..1011183 (-) 906 WP_054190133.1 transglycosylase domain-containing protein -
  ACFIOT_RS05215 tyrS 1011564..1012826 (+) 1263 WP_054190132.1 tyrosine--tRNA ligase -
  ACFIOT_RS05220 htrA 1012920..1014194 (-) 1275 WP_054190131.1 S1C family serine protease Regulator
  ACFIOT_RS05225 - 1014366..1014983 (+) 618 WP_070016692.1 lysophospholipid acyltransferase family protein -
  ACFIOT_RS05230 nagE 1015110..1016576 (+) 1467 WP_054190129.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  ACFIOT_RS05235 - 1016683..1017813 (+) 1131 WP_054190128.1 HAD family hydrolase -
  ACFIOT_RS05240 - 1017774..1017869 (-) 96 WP_054190127.1 hypothetical protein -

Sequence

Protein


Download         Length: 424 a.a.        Molecular weight: 45747.90 Da        Isoelectric Point: 9.8964

>NTDB_id=943598 ACFIOT_RS05220 WP_054190131.1 1012920..1014194(-) (htrA) [Staphylococcus aureus strain t5047]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYIAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=943598 ACFIOT_RS05220 WP_054190131.1 1012920..1014194(-) (htrA) [Staphylococcus aureus strain t5047]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAAACAACAAATAATAAAGGCGGCAATCAATTAGACGGGCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGTGTAGGTTCAGGTGTCATCTATCAAATAAACA
ATAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGATGCTGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCTGGTAACTCAGGCGGCGCATTAGTAGATATAAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATATCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGCCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(307-397)

Trypsin-like peptidase domain (Trypsin_2)

(125-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.557

94.811

0.366