Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFIOT_RS04290 Genome accession   NZ_CP170414
Coordinates   845723..846463 (+) Length   246 a.a.
NCBI ID   WP_054189560.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t5047     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 840723..851463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOT_RS04265 yhaM 841141..842082 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACFIOT_RS04270 - 842203..843165 (-) 963 WP_054189557.1 foldase protein PrsA -
  ACFIOT_RS04275 - 843369..843926 (-) 558 WP_054189558.1 DUF3267 domain-containing protein -
  ACFIOT_RS04280 - 844660..845025 (-) 366 WP_054189559.1 YtxH domain-containing protein -
  ACFIOT_RS04285 - 845167..845589 (-) 423 WP_000004981.1 HIT family protein -
  ACFIOT_RS04290 pptA 845723..846463 (+) 741 WP_054189560.1 ABC transporter ATP-binding protein EcsA Regulator
  ACFIOT_RS04295 ecsB 846456..847679 (+) 1224 WP_054189561.1 ABC transporter permease EcsB -
  ACFIOT_RS04300 traP 847803..848306 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  ACFIOT_RS04305 - 848491..848577 (+) 87 WP_223810123.1 hypothetical protein -
  ACFIOT_RS04310 hemE 848567..849604 (+) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  ACFIOT_RS04315 hemH 849662..850585 (+) 924 WP_054189562.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27633.97 Da        Isoelectric Point: 4.5965

>NTDB_id=943594 ACFIOT_RS04290 WP_054189560.1 845723..846463(+) (pptA) [Staphylococcus aureus strain t5047]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDCDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=943594 ACFIOT_RS04290 WP_054189560.1 845723..846463(+) (pptA) [Staphylococcus aureus strain t5047]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCCGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATTG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545