Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOT_RS03945 Genome accession   NZ_CP170414
Coordinates   797517..798335 (+) Length   272 a.a.
NCBI ID   WP_054189641.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t5047     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 792517..803335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOT_RS03920 - 793133..793663 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  ACFIOT_RS03925 yfkAB 793926..795077 (-) 1152 WP_054191885.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACFIOT_RS03930 - 795301..795462 (+) 162 WP_001005407.1 SE1561 family protein -
  ACFIOT_RS03935 - 795592..796107 (+) 516 WP_054189639.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOT_RS03940 sgtB 796447..797256 (+) 810 WP_054189640.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOT_RS03945 recX 797517..798335 (+) 819 WP_054189641.1 recombination regulator RecX Regulator
  ACFIOT_RS03950 - 798313..798627 (+) 315 WP_000435806.1 YfhH family protein -
  ACFIOT_RS03955 - 798642..800159 (+) 1518 WP_054189642.1 ATP-binding cassette domain-containing protein -
  ACFIOT_RS03960 - 800168..801004 (+) 837 WP_054189643.1 hypothetical protein -
  ACFIOT_RS03965 - 801265..802242 (-) 978 WP_410535749.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32283.11 Da        Isoelectric Point: 6.5234

>NTDB_id=943592 ACFIOT_RS03945 WP_054189641.1 797517..798335(+) (recX) [Staphylococcus aureus strain t5047]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEFCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEKFTELYREQQEFDD
IIHIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=943592 ACFIOT_RS03945 WP_054189641.1 797517..798335(+) (recX) [Staphylococcus aureus strain t5047]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGAATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATTTTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGTACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAAAGTTTACAGAACTTTATAGAGAACAACAGGAATTTGATGAT
ATTATCCACATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGATTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.529

100

0.985