Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFIOR_RS04770 Genome accession   NZ_CP170409
Coordinates   902540..903280 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t359     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 897540..908280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOR_RS04745 yhaM 897958..898899 (+) 942 WP_001244180.1 3'-5' exoribonuclease YhaM -
  ACFIOR_RS04750 - 899020..899982 (-) 963 WP_000782121.1 foldase protein PrsA -
  ACFIOR_RS04755 - 900187..900744 (-) 558 WP_000477963.1 DUF3267 domain-containing protein -
  ACFIOR_RS04760 - 901477..901842 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACFIOR_RS04765 - 901984..902406 (-) 423 WP_000004981.1 HIT family protein -
  ACFIOR_RS04770 pptA 902540..903280 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACFIOR_RS04775 ecsB 903273..904496 (+) 1224 WP_001245768.1 ABC transporter permease EcsB -
  ACFIOR_RS04780 traP 904620..905123 (-) 504 WP_031862852.1 signal transduction protein TRAP -
  ACFIOR_RS04785 - 905286..905396 (+) 111 WP_001790154.1 hypothetical protein -
  ACFIOR_RS04790 hemE 905386..906423 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  ACFIOR_RS04795 hemH 906481..907404 (+) 924 WP_000162885.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=943419 ACFIOR_RS04770 WP_000216874.1 902540..903280(+) (pptA) [Staphylococcus aureus strain t359]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=943419 ACFIOR_RS04770 WP_000216874.1 902540..903280(+) (pptA) [Staphylococcus aureus strain t359]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545