Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOO_RS09500 Genome accession   NZ_CP170406
Coordinates   1941001..1941819 (-) Length   272 a.a.
NCBI ID   WP_054189641.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21635     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1936001..1946819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOO_RS09480 - 1937094..1938071 (+) 978 WP_054189645.1 metal-dependent hydrolase -
  ACFIOO_RS09485 - 1938332..1939168 (-) 837 WP_054189643.1 hypothetical protein -
  ACFIOO_RS09490 - 1939177..1940694 (-) 1518 WP_054189642.1 ATP-binding cassette domain-containing protein -
  ACFIOO_RS09495 - 1940709..1941023 (-) 315 WP_000435806.1 YfhH family protein -
  ACFIOO_RS09500 recX 1941001..1941819 (-) 819 WP_054189641.1 recombination regulator RecX Regulator
  ACFIOO_RS09505 sgtB 1942080..1942889 (-) 810 WP_054189640.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOO_RS09510 - 1943229..1943744 (-) 516 WP_054189639.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOO_RS09515 - 1943874..1944035 (-) 162 WP_001005407.1 SE1561 family protein -
  ACFIOO_RS09520 - 1944382..1944462 (+) 81 WP_100250272.1 hypothetical protein -
  ACFIOO_RS09525 - 1945108..1946553 (-) 1446 WP_252598208.1 SH3 domain-containing protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32283.11 Da        Isoelectric Point: 6.5234

>NTDB_id=943383 ACFIOO_RS09500 WP_054189641.1 1941001..1941819(-) (recX) [Staphylococcus aureus strain t21635]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEFCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEKFTELYREQQEFDD
IIHIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=943383 ACFIOO_RS09500 WP_054189641.1 1941001..1941819(-) (recX) [Staphylococcus aureus strain t21635]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGAATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATTTTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGTACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAAAGTTTACAGAACTTTATAGAGAACAACAGGAATTTGATGAT
ATTATCCACATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGATTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.529

100

0.985