Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACFIOO_RS01460 Genome accession   NZ_CP170406
Coordinates   334990..335835 (+) Length   281 a.a.
NCBI ID   WP_054189506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21635     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 329990..340835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOO_RS01445 - 330257..332098 (-) 1842 WP_054189503.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACFIOO_RS01450 metC 332067..333227 (-) 1161 WP_070016641.1 cystathionine beta-lyase MetC -
  ACFIOO_RS01455 - 333224..334327 (-) 1104 WP_054189505.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACFIOO_RS01460 spo0J 334990..335835 (+) 846 WP_054189506.1 ParB/RepB/Spo0J family partition protein Regulator
  ACFIOO_RS01465 - 335990..336871 (+) 882 WP_000373075.1 mechanosensitive ion channel family protein -
  ACFIOO_RS01470 - 336901..337104 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACFIOO_RS01475 ychF 337116..338213 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACFIOO_RS01480 - 338299..338490 (-) 192 WP_070016643.1 hypothetical protein -
  ACFIOO_RS01485 rpsF 338735..339031 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACFIOO_RS01490 ssbA 339052..339555 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACFIOO_RS01495 rpsR 339607..339849 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32770.79 Da        Isoelectric Point: 10.0000

>NTDB_id=943313 ACFIOO_RS01460 WP_054189506.1 334990..335835(+) (spo0J) [Staphylococcus aureus strain t21635]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLESHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRLIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=943313 ACFIOO_RS01460 WP_054189506.1 334990..335835(+) (spo0J) [Staphylococcus aureus strain t21635]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAACAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAACCTAGAAAAACATTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATATGTATCAGCGATTATTAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGCGTTAGATATTTAGAAAGCCATGTCAATGAATTAAAAA
ATGTTTCGTCAAAATCGGAAACAGATAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTGGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGGTTAATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384