Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   V9W64_RS07765 Genome accession   NZ_CP146598
Coordinates   1653818..1655857 (+) Length   679 a.a.
NCBI ID   WP_274584698.1    Uniprot ID   A0A9X4IDS3
Organism   Neisseria leonii strain 51.81     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1648818..1660857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W64_RS07735 (V9W64_07735) lpxK 1650080..1651084 (+) 1005 WP_274584692.1 tetraacyldisaccharide 4'-kinase -
  V9W64_RS07740 (V9W64_07740) - 1651125..1651307 (+) 183 WP_274584693.1 Trm112 family protein -
  V9W64_RS07745 (V9W64_07745) kdsB 1651304..1652068 (+) 765 WP_274584694.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  V9W64_RS07750 (V9W64_07750) - 1652169..1652594 (+) 426 WP_274584695.1 hypothetical protein -
  V9W64_RS07755 (V9W64_07755) - 1652566..1652931 (+) 366 WP_274584696.1 hypothetical protein -
  V9W64_RS07760 (V9W64_07760) adk 1653045..1653692 (+) 648 WP_274584697.1 adenylate kinase -
  V9W64_RS07765 (V9W64_07765) recG 1653818..1655857 (+) 2040 WP_274584698.1 ATP-dependent DNA helicase RecG Machinery gene
  V9W64_RS07770 (V9W64_07770) - 1656270..1657583 (-) 1314 WP_274584978.1 CitMHS family transporter -
  V9W64_RS07775 (V9W64_07775) - 1657920..1659449 (+) 1530 WP_274584699.1 class I SAM-dependent methyltransferase -
  V9W64_RS07780 (V9W64_07780) - 1659735..1660550 (-) 816 WP_274584700.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 74335.06 Da        Isoelectric Point: 8.4951

>NTDB_id=943266 V9W64_RS07765 WP_274584698.1 1653818..1655857(+) (recG) [Neisseria leonii strain 51.81]
MNPEYCKLLKINDAAAKRLAKLRLHTPWDAVLHLPLRYEDETHIMPIADAPVGVPCQVAGVVRHQEVQFKPRKQLVVQIA
DASGSVLYLRFIHFYPGHQKQLAVGRHIRAVGEIKRGFYGDEMIHPKIRDAESGGLAESLTPVYPTVSGLSQPTLRRIIQ
TALDSVSLHDTLPDELLSRLKLPPLAESLRLLHAPPPDFSIHQLSDGALPAWQRLKFDELLAQQLSMRLARQKRQSGAAE
PLRGTGVWTEKLTAALPFALTAAQQRVLAEIRADMAQPHPMHRLLQGDVGSGKTIVAALAALTAVEAGCQVAVMAPTEIL
AEQHEAKFRQWLEPLGLTVAWLSGSQRKKDKEANKAAVSDGLARIAVGTHALFQDDVAFQNLGLVIVDEQHRFGVAQRLA
LKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDTLPPGRTPVRTRLVNSVRRAEVEGFVLNTCRKGHQAYWVCPLIE
ESETLQLQTAADTLAGLQAALPELNIGMVHGRMKPAEKAAVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMG
LAQLHQLRGRVGRGAAESTCVLLFAEPLGETAKARLKVIYGHTDGFEIARQDLNIRGPGELLGARQSGVPMLRFADLAED
LHLLEQARATAPQLIAQRPDIVEAHLARWQGSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=943266 V9W64_RS07765 WP_274584698.1 1653818..1655857(+) (recG) [Neisseria leonii strain 51.81]
ATGAATCCCGAATACTGCAAGCTGCTCAAAATCAACGATGCCGCCGCCAAACGGCTGGCCAAACTCCGGCTGCATACGCC
GTGGGACGCGGTGCTGCACCTGCCGCTGCGCTATGAAGACGAAACGCACATTATGCCGATTGCCGATGCGCCCGTGGGCG
TGCCGTGTCAGGTGGCGGGTGTGGTGAGGCATCAGGAAGTACAGTTCAAACCGCGAAAACAGCTGGTGGTGCAGATTGCC
GATGCGTCGGGCAGCGTGCTGTACCTGCGCTTTATCCATTTTTATCCCGGCCATCAGAAGCAGTTGGCGGTGGGGCGGCA
TATCCGTGCGGTGGGCGAAATCAAGCGCGGTTTTTACGGCGACGAGATGATTCATCCGAAAATCCGCGATGCCGAAAGCG
GCGGTTTGGCCGAAAGCCTGACCCCCGTTTATCCTACCGTCAGCGGTTTGAGTCAGCCCACGCTGCGCCGCATCATTCAG
ACGGCCTTGGACAGTGTTTCCCTGCACGATACCCTGCCTGATGAGTTATTAAGCCGTCTGAAACTGCCGCCGCTGGCCGA
GAGCCTGCGCCTGCTGCACGCGCCGCCGCCCGATTTCAGTATCCATCAGTTGAGCGACGGCGCATTGCCCGCGTGGCAGC
GGTTGAAGTTTGACGAACTCCTGGCGCAGCAGCTTTCCATGCGGCTGGCGCGGCAGAAGCGGCAGAGCGGGGCGGCCGAA
CCGCTGCGCGGCACGGGCGTTTGGACGGAAAAACTGACCGCCGCCCTGCCGTTTGCGCTGACCGCCGCGCAGCAGCGCGT
GTTGGCCGAAATCCGCGCCGATATGGCGCAGCCGCACCCGATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCAAAA
CCATTGTCGCCGCGCTGGCCGCACTCACGGCCGTCGAAGCGGGCTGCCAGGTGGCGGTGATGGCGCCGACGGAAATTCTG
GCCGAACAGCACGAAGCCAAGTTCAGGCAATGGCTGGAACCGCTGGGCCTGACCGTGGCGTGGCTGTCGGGCAGCCAGCG
CAAAAAAGACAAAGAAGCCAACAAAGCCGCCGTTTCAGACGGCCTCGCCCGCATCGCCGTCGGCACCCACGCGCTGTTTC
AGGACGATGTCGCGTTTCAGAATCTGGGGCTGGTGATTGTCGACGAACAGCACCGCTTCGGCGTGGCGCAGCGGTTGGCG
TTGAAAAACAAAGGGCGGGAGGTGCACCAGCTGATGATGTCGGCCACACCCATTCCGCGCACGCTGGCGATGAGTTTTTT
TGCCGATTTGGACGTTTCCGTGATTGACACGCTGCCGCCGGGGCGCACGCCGGTAAGAACGCGTCTGGTAAACAGCGTGC
GGCGCGCCGAAGTGGAAGGTTTCGTGCTGAACACCTGCCGCAAAGGGCATCAGGCGTATTGGGTCTGCCCGCTGATTGAA
GAGAGCGAAACCCTGCAACTGCAAACCGCCGCCGACACGCTGGCCGGTTTGCAGGCGGCATTGCCCGAGCTGAACATCGG
CATGGTGCACGGACGCATGAAACCGGCCGAAAAAGCCGCCGTGATGGCGGAGTTTGCCGCAGGCCGTCTGAATGTGCTGG
TGGCGACCACAGTGATTGAAGTGGGTGTGGACGTGCCCAATGCCGCTTTGATGGTTATCGAACACGCCGAGCGCATGGGC
TTGGCGCAGCTGCACCAACTGCGCGGGCGGGTGGGGCGCGGCGCGGCCGAAAGCACCTGCGTGCTGCTGTTTGCCGAACC
TTTGGGCGAAACGGCCAAAGCGCGGCTCAAAGTGATATACGGACACACCGACGGCTTTGAAATCGCCCGTCAGGATTTGA
ACATACGCGGGCCGGGCGAGCTGCTCGGCGCGCGCCAAAGCGGCGTGCCGATGCTGCGTTTTGCCGACTTGGCCGAAGAC
CTGCACCTGTTGGAGCAGGCGCGTGCAACCGCGCCGCAGCTGATTGCGCAGCGGCCGGATATTGTCGAAGCCCATCTGGC
CAGATGGCAGGGCAGCCGTGAGGGCTATTTGGGCGTATAG

Domains

Predicted by InterproScan.

RecG wedge domain (RecG_wedge)

(11-165)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-664)

DEAD/DEAH box helicase (DEAD)

(281-420)

Helicase conserved C-terminal domain (Helicase_C)

(466-574)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

82.474

100

0.825