Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   V9W64_RS01580 Genome accession   NZ_CP146598
Coordinates   339707..340168 (+) Length   153 a.a.
NCBI ID   WP_274584356.1    Uniprot ID   A0A9X4E057
Organism   Neisseria leonii strain 51.81     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 334707..345168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W64_RS01565 (V9W64_01565) - 336698..337495 (-) 798 WP_274584354.1 M48 family metallopeptidase -
  V9W64_RS01570 (V9W64_01570) hflX 337589..338704 (-) 1116 WP_274584641.1 GTPase HflX -
  V9W64_RS01575 (V9W64_01575) - 338952..339662 (+) 711 WP_274584355.1 phosphoglycolate phosphatase -
  V9W64_RS01580 (V9W64_01580) recX 339707..340168 (+) 462 WP_274584356.1 recombination regulator RecX Regulator
  V9W64_RS01585 (V9W64_01585) prpB 340590..341465 (+) 876 WP_274584357.1 methylisocitrate lyase -
  V9W64_RS01590 (V9W64_01590) prpC 341553..342701 (+) 1149 WP_274572345.1 2-methylcitrate synthase -
  V9W64_RS01595 (V9W64_01595) - 342836..343291 (+) 456 WP_274584358.1 DMT family transporter -
  V9W64_RS01600 (V9W64_01600) - 343435..344301 (+) 867 WP_274584359.1 DMT family transporter -
  V9W64_RS01605 (V9W64_01605) - 344403..344906 (+) 504 WP_274584360.1 DUF1543 domain-containing protein -
  V9W64_RS01610 (V9W64_01610) - 344940..345077 (+) 138 WP_274584361.1 hypothetical protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17268.58 Da        Isoelectric Point: 9.8606

>NTDB_id=943254 V9W64_RS01580 WP_274584356.1 339707..340168(+) (recX) [Neisseria leonii strain 51.81]
MKPTKSLRSRALEILSRQEISRAELKKKLARHAESEEEIEAVISEFADRNWQSDERFAEAYIHSKSRRHGRLRLQQALAA
KGVDADIVAPLLPGRNEELAAAVGVLEKKFAAPADNPADKLKQMRFLAYRGFDADTVRRALKTAWQAEETENG

Nucleotide


Download         Length: 462 bp        

>NTDB_id=943254 V9W64_RS01580 WP_274584356.1 339707..340168(+) (recX) [Neisseria leonii strain 51.81]
ATGAAACCGACCAAATCCCTGCGCAGCCGCGCCCTCGAAATCCTGTCGCGCCAAGAAATCAGCCGTGCCGAGCTGAAAAA
AAAACTGGCGCGCCATGCCGAAAGCGAGGAAGAAATCGAAGCCGTCATCAGCGAATTTGCCGACCGCAACTGGCAGTCCG
ACGAACGCTTTGCCGAAGCCTATATCCACAGCAAAAGCCGCCGCCACGGCCGTCTGCGCCTGCAACAGGCTCTGGCCGCC
AAAGGCGTGGACGCGGACATCGTCGCGCCGCTGCTGCCCGGCCGCAATGAAGAACTGGCCGCCGCCGTCGGCGTTTTGGA
AAAAAAATTCGCCGCACCGGCGGACAATCCGGCGGACAAACTCAAACAGATGCGCTTTCTCGCCTACCGAGGTTTCGATG
CCGACACCGTCCGCCGCGCCCTGAAAACAGCCTGGCAGGCAGAGGAAACAGAAAACGGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(29-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

66.897

94.771

0.634